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dosreislab / mcmc3r

mcmc3r: an R package for MCMCTree
MIT License
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Error: error in tree: too many species in tree. #13

Closed YDD99 closed 1 year ago

YDD99 commented 1 year ago

singularity exec "/home/xly/soft/PhyloTools.sif" mcmctree mcmctree.ctl > run.log

Error: error in tree: too many species in tree.

mariodosreis commented 1 year ago

Closing this issue as it is not an mcmc3r issue but rather an mcmctree one.

It looks like you may be trying to use a tree that has more species than the default for the program. You can edit the source code to increase the maximum number of taxa and recompile. You can get more help on this on the PAML google forums. If the error persits, please report it to the PAML github repository:

[https://github.com/abacus-gene/paml]()

Please also follow best practice for the reporting of bugs:

[https://www.softwaretestinghelp.com/how-to-write-good-bug-report/]()