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dotnetbio / bio

Bioinformatics library for .NET
Apache License 2.0
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Suffix arrays for alignment #32

Open acesnik opened 6 years ago

acesnik commented 6 years ago

This is a wonderful library of functions for bioinformatic analysis. I'm excited to try it out!

Do you have any plans to implement an alignment algorithm similar to STAR, which uses suffix arrays for string searches?

evolvedmicrobe commented 6 years ago

No plans at the present, but I am a huge fan of all algorithms from Gene Meyers, and I'm sure people would love to see that functionality if you had any interest in contributing it!

jamesmhogan commented 6 years ago

Definitely welcome that functionality if you are interested.