Puzzled about the results of TADCompare.

dozmorovlab / TADCompare

Package for analysis and characterization of differential TADs

https://dozmorovlab.github.io/TADCompare/

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Puzzled about the results of TADCompare. #6

Closed esroom closed 3 years ago

esroom commented 3 years ago

Hi, I'm a little confused about the results of the TADCompare function. I got the results like this. What is the difference between the Differential and Type columns? Could I pick Non-Differential out of the Type column as the different boundaries of two matrices?

mdozmorov commented 3 years ago

Differential column = Differential will indicate strong, likely biologically meaningful differences. Type column has more fine-grained differences of actual TADs, please, see our paper for details.

esroom commented 3 years ago

Thank you for your quick reply.

mdozmorov commented 3 years ago

Closing as resolved. Feel free to ask in this thread, if any other questions.