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dpeerlab / SEACells

SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data
GNU General Public License v2.0
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minor adjustment for load_transcripts function #68

Open Huangy57 opened 4 months ago

Huangy57 commented 4 months ago

This pull request introduces two minor changes to the genescores.py script:

  1. Added case-insensitive Check for 'chr' Prefix: Ensured that chromosome names are consistently prefixed with 'chr' by checking in a case-insensitive manner and adding the prefix if necessary.
  2. Added print statement for missing transcripts: Implemented a print statement to notify users when a transcript could not be found in the database, aiding in debugging.