issues
search
dpeerlab
/
SEACells
SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data
GNU General Public License v2.0
145
stars
26
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Issues of model.initialize_archetypes
#21
fl-yu
closed
1 year ago
3
peak calling for each metacell
#20
fl-yu
closed
1 year ago
1
Add tfactivity module and notebook, update normalization in prepare_multiome_anndata
#19
christinedien
closed
1 year ago
0
model.fit hangs indefinitely
#18
smorabit
opened
2 years ago
12
Type checking needed in initialize_archetypes
#17
smorabit
closed
1 year ago
1
Different metacells gained when repeating analysis on same data set
#16
marie3003
closed
1 year ago
1
Local paths in requirements.txt
#15
maxim-h
opened
2 years ago
3
Which modality to use in Multiome for metacell inference
#14
PauBadiaM
closed
2 years ago
4
SEACells on integrated dataset
#13
mainciburu
closed
2 years ago
2
Compute gene scores without GC content annotation
#12
marie3003
opened
2 years ago
5
Plotting functions cannot be silenced
#11
PauBadiaM
closed
2 years ago
1
Tutorial Data for "SEACell_domain_adapt.ipynb" not available
#10
psl-schaefer
closed
2 years ago
1
Question regarding ATAC Pipeline
#9
psl-schaefer
closed
2 years ago
2
Publication prep
#8
ManuSetty
closed
2 years ago
0
model.fit taking too long?
#7
rargelaguet
closed
2 years ago
2
Passing n_neighbors param to diffusion map computation and fixed plot saving bug
#6
christinedien
closed
2 years ago
1
Fix SEAcell randomness bug and minor changes
#5
d-j-k
closed
2 years ago
1
get_sizes() error
#4
christinedien
closed
2 years ago
1
Atac updates
#3
ManuSetty
closed
2 years ago
0
number of SEACells
#2
roshan9128
closed
2 years ago
1
Error in model.summarize_by_metacell when raw count is stored at other place
#1
YubinXie
closed
2 years ago
1
Previous