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dpseidel / stmove

Build reproducible reports for spatial-temporal animal movement analysis
https://www.danaseidel.com/stmove/
GNU General Public License v3.0
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Work in Progress: Wavelet (and Kalman Smoothing) #1

Closed doughertyeric closed 5 years ago

doughertyeric commented 5 years ago

Just want to get something here on wavelets; still needs formatting and integration into existing codebase. Taken from a specific application to zebra and springbok data, so it will require a bit of effort to make it generalizable and readable.

dpseidel commented 5 years ago

Great. The kalman filter will be a nice add - better than the na.approx method I'm currently borrowing from zoo. Do you envision me working with this to help reformat or just leaving it to you? Either way is fine by me.

doughertyeric commented 5 years ago

I can take a stab at it first and if I do a shit job integrating with your existing code, you can take over.

What is, like, the pipeline that creates the report? Are you calling the distribution functions somewhere I can’t find?

On Dec 13, 2018, at 1:37 PM, Dana Paige Seidel notifications@github.com wrote:

Great. The kalman filter will be a nice add - better than the na.approx method I'm currently borrowing from zoo. Do you envision me working with this to help reformat or just leaving it to you? Either way is fine by me.

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/dpseidel/stmove/pull/1#issuecomment-447074220, or mute the thread https://github.com/notifications/unsubscribe-auth/AdYbi8CVpfNoJ33pTl0HrmbzoRQ3HnRqks5u4p56gaJpZM4ZRnu9.

dpseidel commented 5 years ago

Yeah, everything is called from the Report.Rmd template in the main directory which is knitted from the build_report function. You'll need to add any parameters/arguments you'd need to pass to your function in the report to the build_report function and to the .Rmd yaml.

doughertyeric commented 5 years ago

Ohh, okay. I’ll take a look and hopefully get that sorted. I’ll let you know if I have questions.

Thank you!

Also, rhinos incoming…

On Dec 13, 2018, at 1:46 PM, Dana Paige Seidel notifications@github.com wrote:

Yeah, everything is called from the Report.Rmd template in the main directory which is knitted from the build_report function. You'll need to add any parameters/arguments you'd need to pass to your function in the report to the build_report function and to the .Rmd yaml.

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/dpseidel/stmove/pull/1#issuecomment-447077056, or mute the thread https://github.com/notifications/unsubscribe-auth/AdYbixuLN6gSUSO86C1lDJPCMlYiYRUQks5u4qCPgaJpZM4ZRnu9.