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dptech-corp / Uni-Fold

An open-source platform for developing protein models beyond AlphaFold.
https://doi.org/10.1101/2022.08.04.502811
Apache License 2.0
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model_5_multimer_v2 config #65

Closed lhatsk closed 2 years ago

lhatsk commented 2 years ago

Hi,

I am trying to get model_5_multimer_v2 working, changing the multimer_af2 config accordingly. I thought it just requires disabling templating:

    c.model.template.enabled = False
    c.model.template.embed_angles = False
    recursive_set(c, "use_templates", False)
    recursive_set(c, "use_template_torsion_angles", False)

I run into the following issue:

alphafold/alphafold_iteration/evoformer/pair_activiations//weights is not a file in the archive

Any idea how to resolve it? I thought the multimer configs are identical except for templating.

Thanks in advance!

lhatsk commented 2 years ago

is_multimer wasn't set correctly in import_jaxweights for my new model.