Closed dputhier closed 3 years ago
Hi Denis,
You are right, there is not good reason why this is so. It is an artifact of the way I implemented exact and inexact counting in the code, it was simpler to write the arguments like this at the time.
I should give a separate argument for exact and inexact. I'll get on it as soon as I can.
Working on it right now. I am making some more backend changes (exposing additional parameters in MODL's API) and I'll push it along with the rest, once all the unitary tests pass.
Fixed in 2731a7fe471801d377b6ccf0faa6fb856d12484d.
Hi @qferre, I dont understand why setting -mocs to --more-bed +1 give exact combination (I guess this is length(--more-bed) + 1). If reference regions are A,B,C I could be interested in query+X+Y in exact mode but not query+X+Y+Z. My feeling is that a second argument controlling exact/inexact would be required. But there is maybe something I missed...