Peak_anno new feature idea: --peak-file taking list instead of only one file

dputhier / pygtftk

A python package and a set of shell commands to handle GTF files

GNU General Public License v3.0

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Peak_anno new feature idea: --peak-file taking list instead of only one file #7

Closed dputhier closed 5 years ago

dputhier commented 6 years ago

It would imply giving fraction of overlaps instead of number of overlaps which depend on the number of peaks. This would not require so much modifications.

change the argument type to action=a arg_formatter.bedFileList .
Add a novel argument to set order of peak dataset inside bar sets.
Some tuning regarding the R code mainly when writing p-val results.

Thx Guillaume for this idea.

dputhier commented 5 years ago

No sure we will go for that at the moment. Reopen if still needed.