Models which are partially annotated or which include a manually added reference to another database identifier like http://identifiers.org/chebi/CHEBI:37637 (as MIRIAM annotation) can't be annotated currently by ModelPolisher.
This issue focuses on mapping information available from the annotation (data source, identifier), for species and reactions currently, to their corresponding BiGGIds using the synonym table from BiGG Database.
Once we obtain the BiGGId we can easily annotate the model completely. Thus this will enable ModelPolisher to add annotations to species and reactions which do not have BiGGIds, or whose ids may have been tampered for some causes.
Models which are partially annotated or which include a manually added reference to another database identifier like
http://identifiers.org/chebi/CHEBI:37637(as MIRIAM annotation) can't be annotated currently by ModelPolisher. This issue focuses on mapping information available from the annotation (data source, identifier), for species and reactions currently, to their corresponding BiGGIds using thesynonymtable from BiGG Database. Once we obtain the BiGGId we can easily annotate the model completely. Thus this will enable ModelPolisher to add annotations to species and reactions which do not have BiGGIds, or whose ids may have been tampered for some causes.