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draeger-lab / SPECIMEN

Automated pipeline for strain-specific metabolic modeling based on a high-quality template model.
GNU General Public License v3.0
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Implement PGAB pipeline #10

Open cb-Hades opened 4 months ago

cb-Hades commented 4 months ago

Implement a workflow for the PGAB pipeline as described in the docs.

Also handle GFF to contain the same found NCBI Protein IDs as the FASTA file in the end.