Bump networkx from 3.0 to 3.1

[dependabot[bot]]

Bumps networkx from 3.0 to 3.1.

Release notes

Sourced from networkx's releases.

NetworkX 3.1

No release notes provided.

networkx-3.1rc0

What's Changed

• Fix link in isomorphvf2.py by @​paulitapb in networkx/networkx#6347
• Update precommit hooks by @​jarrodmillman in networkx/networkx#6348
• Add clique examples and deprecate helper funtions by @​rossbar in networkx/networkx#6186
• Laplace centrality for issue 4973 by @​gaborberei in networkx/networkx#5399
• doc:improve doc of possible values of nodes and expected behaviour by @​tinaoberoi in networkx/networkx#6333
• add OrderedGraph removal as an API change in release_3.0.rst by @​dschult in networkx/networkx#6354
• Update release_3.0 authors (add Jim and Erik) by @​eriknw in networkx/networkx#6356
• Fix broken link nx guide by @​paulitapb in networkx/networkx#6361
• Add nx-guide link in the tutorial by @​paulitapb in networkx/networkx#6353
• DOC: Minor formatting fixups to get rid of doc build warnings. by @​rossbar in networkx/networkx#6363
• Fix ecuation in clustering documentation by @​paulitapb in networkx/networkx#6369
• Add reference to paper in vf2pp by @​paulitapb in networkx/networkx#6373
• provide tikz with degrees, not radians by @​dimpase in networkx/networkx#6360
• Improve handling of create_using to allow Mixins of type Protocol by @​dschult in networkx/networkx#6244
• Remove an instance of random.sample from a set (deprecated in Python 3.9) by @​eriknw in networkx/networkx#6380
• DOC: Add banner for user survey annoucement by @​MridulS in networkx/networkx#6375
• bump pre-commit hooks (and fix CI) by @​danieleades in networkx/networkx#6396
• Add generate / write "network text" (formerly graph_str) by @​Erotemic in networkx/networkx#5602
• Improve doc regular graphs by @​paulitapb in networkx/networkx#6397
• Fix link vonoroi by @​paulitapb in networkx/networkx#6398
• Document PageRank algo convergence condition by @​Qudirah in networkx/networkx#6212
• Fix pre-commit on Python 3.10 by @​rossbar in networkx/networkx#6407
• DOC: list pred method for MultiDiGraphs by @​MridulS in networkx/networkx#6409
• Delete warning in approximation documentation by @​paulitapb in networkx/networkx#6221
• Comment out unused unlayered dict construction. by @​rossbar in networkx/networkx#6411
• Update installation test instructions by @​EricPostMaster in networkx/networkx#6303
• Added new tests in test_clique.py by @​paulitapb in networkx/networkx#6142
• Added test in project. Coverage up to 100. by @​Mjh9122 in networkx/networkx#6196
• Add dispatching to more shortest path algorithms by @​eriknw in networkx/networkx#6415
• Add Plausible Analytics to our docs by @​MridulS in networkx/networkx#6413
• Fix docstring heading title. by @​rossbar in networkx/networkx#6424
• Added tests to test_directed.py. by @​Mjh9122 in networkx/networkx#6208
• Gallery example for Maximum Independent Set by @​stanyas in networkx/networkx#5563
• spectral bisection for graphs using fiedler vector by @​MridulS in networkx/networkx#6404
• Update developer requirements by @​jarrodmillman in networkx/networkx#6429
• Fix reference in line.py-inverse_line_graph by @​Blueclaus13 in networkx/networkx#6434
• Add project desc for visualization and ISMAGs by @​dschult in networkx/networkx#6432
• Lint using Ruff by @​danieleades in networkx/networkx#6371
• add ruff commit to git-blame-ignore by @​MridulS in networkx/networkx#6440
• NXEP 0 and NXEP 1 - change status to Accepted by @​MridulS in networkx/networkx#5343
• Bump gh-pages deploy bot version. by @​rossbar in networkx/networkx#6446
• Start using ruff for pyupgrade and isort by @​MridulS in networkx/networkx#6441
• Add documentation building to contributor guide by @​rossbar in networkx/networkx#6437
• Reset deploy-action param names for latest version. by @​rossbar in networkx/networkx#6451
• Doc upgrade paley graph by @​paulitapb in networkx/networkx#6399

... (truncated)

Commits

• 9210d9c Designate 3.1 release
• 13ea1f1 Prep 3.1 release
• 8776211 Draft release notes (#6621)
• 7297ae8 Fix typos (#6620)
• c55f870 Resolve NXEP4 with justification for not implementing it. (#6617)
• 020eaf6 Fix module docstring format for ismags reference article. (#6611)
• cf7158e Better default alpha value for viz attributes in gexf writer (#6612)
• 7366c9f Minor docs/test maintenance (#6614)
• f26a170 Fixed method description in ismags.py (#6600)
• 6574d58 corrections to docstring of weisfeiler_lehman_subgraph_hashes (#6598)
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