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drieslab / Giotto

Spatial omics analysis toolbox
https://drieslab.github.io/Giotto_website/
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Creating object with processed data is not available in Giotto Suite #272

Open cranetht opened 2 years ago

cranetht commented 2 years ago

Hi， Giotto Suite 2.0.0.997 is currently the version I installed. However, the function createGiottoObject() no longer supported processed data, such as normalized expr, scaled expr because of decreapition of norm_expr etc. Is there any other way to add my processed data? Or if you could add back these functions in the future?

cranetht commented 2 years ago

Ok, I figured it out by checking the source code. Importing processed expression matrix can be done by list(). createGiottoObject(expression = list())