gcyuan
commented
2 years ago Hi, Thanks for your interest in using Giotto. The issue you had was due to the fact that Giotto Viewer was built upon an old version of Giotto. Unfortunately we have not been able to keep it updated. I am forwarding your message to Dr Qian Zhu who is the original developer of Giotto Viewer for advice. Best Guo-Cheng
On Oct 18, 2022, at 6:17 AM, bio-xtt @.***> wrote:
Hello, recently I used the Giotto developed by you. I get a gitto object according to (https://rubd.github.io/Giotto_site/articles/mouse_merFISH_preoptic_region_200909.html ) website tutorial and installed giotto-viewer through the (pip install giotto-viewer ) command. When I use exportGiottoViewer to visualize the object and run the shell command in the corresponding folder as prompted, i get the following errors: smfish_step1_setup is prompted: command not found and smfish_read_config: command not found errors.
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bio-xtt
Hello, recently I used the Giotto developed by you. I get a gitto object according to (https://rubd.github.io/Giotto_site/articles/mouse_merFISH_preoptic_region_200909.html ) website tutorial and installed giotto-viewer through the (pip install giotto-viewer ) command. When I use exportGiottoViewer to visualize the object and run the shell command in the corresponding folder as prompted, i get the following errors: smfish_step1_setup is prompted: command not found and smfish_read_config: command not found errors.