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drivenbyentropy / aptasuite

A full-featured bioinformatics software collection for the comprehensive analysis of aptamers in HT-SELEX experiments.
https://drivenbyentropy.github.io/
GNU General Public License v3.0
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Error invoking construtor of AptamerPool backend #70

Open rredman22 opened 5 years ago

rredman22 commented 5 years ago

Hello, I am trying to use AptaSuite but am having issues setting up (windows 10, aptasuite0.9.4). The executable jar file works but after inputting and choosing fastq files to open the window closes. When I check folder where the files were supposed to be saved there is a configuration.aptasuite file that does not open and a log that says this..Thanks for your time.

System Information: Java Version: 1.8.0_211 JavaFX Version: null OS Name: Windows 10 OS Version: 10.0 OS Architecture: x86 OS Architecture Model: 32 CPU cores: 4 System Memory: 16252928 Mb

AptaSuite version read from file. Version is 0.9.4

Starting New Experiment Wizard

Reading configuration from file.

Could not find Experiment.projectPath on disk.

Starting New Experiment Wizard

Written Configuration file to C:\Users\Redman

Reading configuration from file.

Could not find Experiment.projectPath on disk.

Creating Database

Error invoking construtor of AptamerPool backend

Error invoking AptamerPool backend

Bioanalytica commented 4 years ago

Looks like there is a mismatch between the location of the config file and the location of the seq files on the system. Are the fastq(.gz) files stored locally? There could be an issue if you're using a remote/cloud/mounted storage system. If you open the config file in Notepad(++) it should have written out the location of the seq files, make sure they have the correct path.