drivenbyentropy / aptasuite

A full-featured bioinformatics software collection for the comprehensive analysis of aptamers in HT-SELEX experiments.
https://drivenbyentropy.github.io/
GNU General Public License v3.0
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Error AptamerPool backend #74

Closed CaptainValerie closed 4 years ago

CaptainValerie commented 4 years ago

Hello there,

APTASUITE is breaking down instantly on loading a new or already existing data set. Either while opening APTASUITE data or while uploading a fastq file APTASUITE closes immediately.

The log shows each time two Errors in a row:

Error invoking construtor of AptamerPool backend

Error invoking AptamerPool backend

I downloaded additional javafx and included it in the /lib folder without achieving any change. I'm using APTASUITE 0.9.4 Maven and Githup are downloaded as well but java files are not installable so how to use them?

Two log files are attached: log_2019-10-10_14-01-25.txt log_2019-10-10_13-40-25.txt

Thank's for any help in advance!

drivenbyentropy commented 4 years ago

Thank you for reporting this.

JavaFX should be installed with your current Java distribution, not included in the lib folder. Since you are getting a GUI, it is safe to say that that is the case. I noticed that you are storing your data in a Dropbox folder. The way in which Dropbox handles file/folder permissions is known to interfere with AptaSUITE. Could you please try to move it to a local folder and try again?

Thank you.

CaptainValerie commented 4 years ago

Hey there, thanks for this incredible fast response!I already moved the whole package to the Desktop and still get the same result. Might there be any performance restrictions from Windows? Would you accept a Team viewer Support request?

drivenbyentropy commented 4 years ago

There should be no restrictions based on operating system. Just to make sure, when you say you moved the whole package to the Desktop, are you referring to AptaSUITE, or the data you are trying to analyze ? I was referring to the latter, i.e. to make sure that the data you are importing and the project folder, are not located in a Dropbox folder.

As for Teamviewer, I do not provide remote support, sorry.

CaptainValerie commented 4 years ago

Problem solved. I got it working, it was just the wrong Java Version (32 bit).

thanks again, a lot for this fast support!