drizopoulos / GLMMadaptive

GLMMs with adaptive Gaussian quadrature
https://drizopoulos.github.io/GLMMadaptive/
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May I know how to get the effect size of a two-part mixed effects model? #39

Closed ZZZZZch closed 2 years ago

ZZZZZch commented 2 years ago

Hello Prof Dimitris Rizopoulos,

Many thanks for developing such a great tool for us.

I'm developing a two-part mixed effects model for semi-continuous data. May I know how to get the effect size of the model? Maybe just like conditional or marginal R square for general mixed effects models?

Have a blessed 2022!

Chenghao

drizopoulos commented 2 years ago

Hi, it isn’t clear what you mean by effect size in such a model.

—— Professor of Biostatistics Erasmus Medical Center Rotterdam The Netherlands


Από: Vickers Zhu @.> Στάλθηκε: Friday, January 7, 2022 9:46:10 AM Προς: drizopoulos/GLMMadaptive @.> Κοιν.: Subscribed @.***> Θέμα: [drizopoulos/GLMMadaptive] May I know how to get the effect size of a two-part mixed effects model? (Issue #39)

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Hello Prof Dimitris Rizopoulos,

Many thanks for developing such a great tool for us.

I'm developing a two-part mixed effects model for semi-continuous data. May I know how to get the effect size of the model? Maybe just like conditional or marginal R square for general mixed effects models?

Have a blessed 2022!

Chenghao

— Reply to this email directly, view it on GitHubhttps://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fdrizopoulos%2FGLMMadaptive%2Fissues%2F39&data=04%7C01%7Cd.rizopoulos%40erasmusmc.nl%7C279d644fc97f428f21bb08d9d1ba283e%7C526638ba6af34b0fa532a1a511f4ac80%7C0%7C0%7C637771419738625711%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=A3rmZd4o3DFb2Wih5P%2B5XzGvRS37QYZlYdC0iTyd84A%3D&reserved=0, or unsubscribehttps://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fnotifications%2Funsubscribe-auth%2FADE7TT65X5B7JCI7E2IJFZDUU2R5FANCNFSM5LOJPHVQ&data=04%7C01%7Cd.rizopoulos%40erasmusmc.nl%7C279d644fc97f428f21bb08d9d1ba283e%7C526638ba6af34b0fa532a1a511f4ac80%7C0%7C0%7C637771419738625711%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=QAMHo1ABTcQSvTKsvgAEr%2FuGqpNM9JJVDyK%2Fmtkfgek%3D&reserved=0. You are receiving this because you are subscribed to this thread.Message ID: @.***>

ZZZZZch commented 2 years ago

Hi Prof,

Sorry for my unclear expression.

I notice that in many research papers, when using a general mixed-effect model, they would introduce how the quality of their model was assessed, like reporting the percentage of correctly predicted observations, calculating the value of marginal and conditional R2, or comparing the BIC or AIC values with those of a null model.

When using GLMMadaptive to fit a two-part mixed-effects model, what kind of way you may recommend evaluating the quality of the models?

Chenghao

drizopoulos commented 2 years ago

I’m not aware of an R^2 for two-part models, but the AIC and BIC are calculated in the package.


Από: Vickers Zhu @.> Στάλθηκε: Friday, January 7, 2022 2:09:59 PM Προς: drizopoulos/GLMMadaptive @.> Κοιν.: Dimitris Rizopoulos @.>; Comment @.> Θέμα: Re: [drizopoulos/GLMMadaptive] May I know how to get the effect size of a two-part mixed effects model? (Issue #39)

Waarschuwing: Deze e-mail is afkomstig van buiten de organisatie. Klik niet op links en open geen bijlagen, tenzij u de afzender herkent en weet dat de inhoud veilig is. Caution: This email originated from outside of the organization. Do not click links or open attachments unless you recognize the sender and know the content is safe.

Hi Prof,

Sorry for my unclear expression.

I notice that in many research papers, when using a general mixed-effect model, they would introduce how the quality of their model was assessed, like reporting the percentage of correctly predicted observations, calculating the value of marginal and conditional R2, or comparing the BIC or AIC values with those of a null model.

When using GLMMadaptive to fit a two-part mixed-effects model, what kind of way you may recommend evaluating the quality of the models?

Chenghao

— Reply to this email directly, view it on GitHubhttps://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fdrizopoulos%2FGLMMadaptive%2Fissues%2F39%23issuecomment-1007394418&data=04%7C01%7Cd.rizopoulos%40erasmusmc.nl%7C5584a9f51d024ad6355308d9d1df0300%7C526638ba6af34b0fa532a1a511f4ac80%7C0%7C0%7C637771578024471858%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=lOMnCTj%2F%2Bh7Xl4CULAXPzOEsVtedA9EBXzN56%2FvNrAI%3D&reserved=0, or unsubscribehttps://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fnotifications%2Funsubscribe-auth%2FADE7TTYCZVCTBQEOKRK4U3DUU3Q2PANCNFSM5LOJPHVQ&data=04%7C01%7Cd.rizopoulos%40erasmusmc.nl%7C5584a9f51d024ad6355308d9d1df0300%7C526638ba6af34b0fa532a1a511f4ac80%7C0%7C0%7C637771578024481810%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=dQLO2bDWMjg8t09Yd1QjUp%2Ft%2BZMG4xBXtY6HTByr2Y0%3D&reserved=0. You are receiving this because you commented.Message ID: @.***>

ZZZZZch commented 2 years ago

Thank you Prof Rizopoulos, then I'll report AICs and BIC in paper first. Many thanks again.