dsarov / ARDaP

Comprehensive resistance detection from WGS data
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Resfinder intervals #28

Closed dsarov closed 2 years ago

dsarov commented 2 years ago

ARDaP now uses Resfinder instead of CARD for much, much more accurate AMR prediction. This update also greatly speeds up ARDaP by only looking at the critical parts of the genome detailed in the database file. All other regions are ignored.