Scheduled biweekly dependency update for week 23

Updates

Here's a list of all the updates bundled in this pull request. I've added some links to make it easier for you to find all the information you need.

SQLAlchemy	1.1.9	»	1.1.10	PyPI \| Changelog \| Homepage
SQLAlchemy	1.1.9	»	1.1.10	PyPI \| Changelog \| Homepage
Sphinx	1.5.6	»	1.6.2	PyPI \| Changelog \| Homepage
cryptography	1.8.1	»	1.9	PyPI \| Changelog \| Repo
pytest	3.0.7	»	3.1.1	PyPI \| Changelog \| Repo \| Homepage

Changelogs

SQLAlchemy 1.1.9 -> 1.1.10

1.1.10

:released: Friday, May 19, 2017

.. change:: 3986 :tags: bug, orm :versions: 1.2.0b1 :tickets: 3986

   Fixed bug where a cascade such as &quot;delete-orphan&quot; (but others as well)
   would fail to locate an object linked to a relationship that itself
   is local to a subclass in an inheritance relationship, thus causing
   the operation to not take place.

.. change:: 3975 :tags: bug, oracle :versions: 1.2.0b1 :tickets: 3975

   Fixed bug in cx_Oracle dialect where version string parsing would
   fail for cx_Oracle version 6.0b1 due to the &quot;b&quot; character.  Version
   string parsing is now via a regexp rather than a simple split.

.. change:: 3980 :tags: bug, ext :versions: 1.2.0b1 :tickets: 3980

   Protected against testing &quot;None&quot; as a class in the case where
   declarative classes are being garbage collected and new
   automap prepare() operations are taking place concurrently, very
   infrequently hitting a weakref that has not been fully acted upon
   after gc.

.. change:: :tags: bug, postgresql :versions: 1.2.0b1

   Added &quot;autocommit&quot; support for GRANT, REVOKE keywords.  Pull request
   courtesy Jacob Hayes.

.. change:: 3966 :tags: bug, mysql :versions: 1.2.0b1 :tickets: 3966

   Removed an ancient and unnecessary intercept of the UTC_TIMESTAMP
   MySQL function, which was getting in the way of using it with a
   parameter.

.. change:: 3961 :tags: bug, mysql :versions: 1.2.0b1 :tickets: 3961

   Fixed bug in MySQL dialect regarding rendering of table options in
   conjunction with PARTITION options when rendering CREATE TABLE.
   The PARTITION related options need to follow the table options,
   whereas previously this ordering was not enforced.

.. changelog::

SQLAlchemy 1.1.9 -> 1.1.10

1.1.10

:released: Friday, May 19, 2017

.. change:: 3986 :tags: bug, orm :versions: 1.2.0b1 :tickets: 3986

   Fixed bug where a cascade such as &quot;delete-orphan&quot; (but others as well)
   would fail to locate an object linked to a relationship that itself
   is local to a subclass in an inheritance relationship, thus causing
   the operation to not take place.

.. change:: 3975 :tags: bug, oracle :versions: 1.2.0b1 :tickets: 3975

   Fixed bug in cx_Oracle dialect where version string parsing would
   fail for cx_Oracle version 6.0b1 due to the &quot;b&quot; character.  Version
   string parsing is now via a regexp rather than a simple split.

.. change:: 3980 :tags: bug, ext :versions: 1.2.0b1 :tickets: 3980

   Protected against testing &quot;None&quot; as a class in the case where
   declarative classes are being garbage collected and new
   automap prepare() operations are taking place concurrently, very
   infrequently hitting a weakref that has not been fully acted upon
   after gc.

.. change:: :tags: bug, postgresql :versions: 1.2.0b1

   Added &quot;autocommit&quot; support for GRANT, REVOKE keywords.  Pull request
   courtesy Jacob Hayes.

.. change:: 3966 :tags: bug, mysql :versions: 1.2.0b1 :tickets: 3966

   Removed an ancient and unnecessary intercept of the UTC_TIMESTAMP
   MySQL function, which was getting in the way of using it with a
   parameter.

.. change:: 3961 :tags: bug, mysql :versions: 1.2.0b1 :tickets: 3961

   Fixed bug in MySQL dialect regarding rendering of table options in
   conjunction with PARTITION options when rendering CREATE TABLE.
   The PARTITION related options need to follow the table options,
   whereas previously this ordering was not enforced.

.. changelog::

Sphinx 1.5.6 -> 1.6.2

1.6.2

=====================================

Incompatible changes

3789: Do not require typing module for python>=3.5

Bugs fixed

3754: HTML builder crashes if HTML theme appends own stylesheets

3756: epub: Entity 'mdash' not defined

3758: Sphinx crashed if logs are emitted in conf.py

3755: incorrectly warns about dedent with literalinclude

3742: RTD <https://readthedocs.org/> PDF builds of Sphinx own docs are missing an index entry in the bookmarks and table of contents. This is rtfd/readthedocs.org2857 <https://github.com/rtfd/readthedocs.org/issues/2857> issue, a workaround is obtained using some extra LaTeX code in Sphinx's own :file:conf.py

3770: Build fails when a "code-block" has the option emphasize-lines and the number indicated is higher than the number of lines

3774: Incremental HTML building broken when using citations

3772: 'str object' has no attribute 'filename'

3763: got epubcheck validations error if epub_cover is set

3779: 'ImportError' in sphinx.ext.autodoc due to broken 'sys.meta_path'. Thanks to Tatiana Tereshchenko.

3796: env.resolve_references() crashes when non-document node given

3803: Sphinx crashes with invalid PO files

3791: PDF "continued on next page" for long tables isn't internationalized

3788: smartquotes emits warnings for unsupported languages

3807: latex Makefile for make latexpdf is only for unixen

3781: double hyphens in option directive are compiled as endashes

3817: latex builder raises AttributeError

1.6.1

=====================================

Dependencies

1.6

LDML format support in i18n feature

sphinx.addnodes.termsep

Some functions and classes in sphinx.util.pycompat: zip_longest, product, all, any, next, open, class_types, base_exception, relpath, StringIO, BytesIO. Please use the standard library version instead;

If any deprecation warning like RemovedInSphinxXXXWarning are displayed, please refer :ref:when-deprecation-warnings-are-displayed.

Features added

1.6b3

3588: No compact (p tag) html output in the i18n document build even when :confval:html_compact_lists is True.

The make latexpdf from 1.6b1 (for GNU/Linux and Mac OS, using latexmk) aborted earlier in case of LaTeX errors than was the case with 1.5 series, due to hard-coded usage of --halt-on-error option. (refs 3695)

3683: sphinx.websupport module is not provided by default

3683: Failed to build document if builder.css_file.insert() is called

3714: viewcode extension not taking highlight_code='none' in account

3698: Moving :doc: to std domain broke backwards compatibility

3633: misdetect unreferenced citations

1.6b2

3662: builder.css_files is deprecated. Please use add_stylesheet() API instead.

1.6b1

sphinx.util.compat.Directive class is now deprecated. Please use docutils.parsers.rst.Directive instead.

sphinx.util.compat.docutils_version is now deprecated

2367: Sphinx.warn(), Sphinx.info() and other logging methods are now deprecated. Please use sphinx.util.logging (:ref:logging-api) instead.

3318: notice is now deprecated as LaTeX environment name and will be removed at Sphinx 1.7. Extension authors please use sphinxadmonition instead (as Sphinx does since 1.5.)

Sphinx.status_iterator() and Sphinx.old_status_iterator() is now deprecated. Please use sphinx.util:status_iterator() instead.

Sphinx._directive_helper() is deprecated. Please use sphinx.util.docutils.directive_helper() instead.

BuildEnvironment.set_warnfunc() is now deprecated

Following methods of BuildEnvironment is now deprecated.

BuildEnvironment.note_toctree()

BuildEnvironment.get_toc_for()

BuildEnvironment.get_toctree_for()

BuildEnvironment.create_index()

Please use sphinx.environment.adapters modules instead.

latex package footnote is not loaded anymore by its bundled replacement footnotehyper-sphinx. The redefined macros keep the same names as in the original package.

3429: deprecate config setting latex_keep_old_macro_names. It will be removed at 1.7, and already its default value has changed from True to False.

3221: epub2 builder is deprecated

3254: sphinx.websupport is now separated into independent package; sphinxcontrib-websupport. sphinx.websupport will be removed in Sphinx-2.0.

3628: sphinx_themes entry_point is deprecated. Please use sphinx.html_themes instead.

cryptography 1.8.1 -> 1.9

1.9


* **BACKWARDS INCOMPATIBLE:** Elliptic Curve signature verification no longer
 returns ``True`` on success. This brings it in line with the interface&#39;s
 documentation, and our intent. The correct way to use
 :meth:`~cryptography.hazmat.primitives.asymmetric.ec.EllipticCurvePublicKey.verify`
 has always been to check whether or not
 :class:`~cryptography.exceptions.InvalidSignature` was raised.
* **BACKWARDS INCOMPATIBLE:** Dropped support for macOS 10.7 and 10.8.
* **BACKWARDS INCOMPATIBLE:** The minimum supported PyPy version is now 5.3.
* Python 3.3 support has been deprecated, and will be removed in the next
 ``cryptography`` release.
* Add support for providing ``tag`` during
 :class:`~cryptography.hazmat.primitives.ciphers.modes.GCM` finalization via
 :meth:`~cryptography.hazmat.primitives.ciphers.AEADDecryptionContext.finalize_with_tag`.
* Fixed an issue preventing ``cryptography`` from compiling against
 LibreSSL 2.5.x.
* Added
 :meth:`~cryptography.hazmat.primitives.asymmetric.ec.EllipticCurvePublicKey.key_size`
 and
 :meth:`~cryptography.hazmat.primitives.asymmetric.ec.EllipticCurvePrivateKey.key_size`
 as convenience methods for determining the bit size of a secret scalar for
 the curve.
* Accessing an unrecognized extension marked critical on an X.509 object will
 no longer raise an ``UnsupportedExtension`` exception, instead an
 :class:`~cryptography.x509.UnrecognizedExtension` object will be returned.
 This behavior was based on a poor reading of the RFC, unknown critical
 extensions only need to be rejected on certificate verification.
* The CommonCrypto backend has been removed.
* MultiBackend has been removed.
* ``Whirlpool`` and ``RIPEMD160`` have been deprecated.

### 1.8.2

Fixed a compilation bug affecting OpenSSL 1.1.0f.
Updated Windows and macOS wheels to be compiled against OpenSSL 1.1.0f.

pytest 3.0.7 -> 3.1.1

3.1.1

=========================

Bug Fixes

pytest warning capture no longer overrides existing warning filters. The previous behaviour would override all filters and caused regressions in test suites which configure warning filters to match their needs. Note that as a side-effect of this is that DeprecationWarning and PendingDeprecationWarning are no longer shown by default. (2430)

Fix issue with non-ascii contents in doctest text files. (2434)

Fix encoding errors for unicode warnings in Python 2. (2436)

pytest.deprecated_call now captures PendingDeprecationWarning in context manager form. (2441)

Improved Documentation

Addition of towncrier for changelog management. (2390)

3.1.0

==================

New Features

The pytest-warnings plugin has been integrated into the core and now pytest automatically captures and displays warnings at the end of the test session.

.. warning::

This feature may disrupt test suites which apply and treat warnings themselves, and can be disabled in your pytest.ini:

.. code-block:: ini

[pytest] addopts = -p no:warnings

See the warnings documentation page <https://docs.pytest.org/en/latest/warnings.html>_ for more information.

Thanks nicoddemus_ for the PR.

Added junit_suite_name ini option to specify root <testsuite> name for JUnit XML reports (533_).

Added an ini option doctest_encoding to specify which encoding to use for doctest files. Thanks wheerd for the PR (2101).

pytest.warns now checks for subclass relationship rather than class equality. Thanks lesteve for the PR (2166)

pytest.raises now asserts that the error message matches a text or regex with the match keyword argument. Thanks Kriechi_ for the PR.

pytest.param can be used to declare test parameter sets with marks and test ids. Thanks RonnyPfannschmidt_ for the PR.

Changes

remove all internal uses of pytestnamespace hooks, this is to prepare the removal of preloadconfig in pytest 4.0 Thanks to RonnyPfannschmidt for the PR.

pytest now warns when a callable ids raises in a parametrized test. Thanks fogo_ for the PR.

It is now possible to skip test classes from being collected by setting a __test__ attribute to False in the class body (2007). Thanks to syre for the report and lwm_ for the PR.

Change junitxml.py to produce reports that comply with Junitxml schema. If the same test fails with failure in call and then errors in teardown we split testcase element into two, one containing the error and the other the failure. (2228) Thanks to kkoukiou for the PR.

Testcase reports with a url attribute will now properly write this to junitxml. Thanks fushi for the PR (1874).

Remove common items from dict comparision output when verbosity=1. Also update the truncation message to make it clearer that pytest truncates all assertion messages if verbosity < 2 (1512). Thanks mattduck for the PR

--pdbcls no longer implies --pdb. This makes it possible to use addopts=--pdbcls=module.SomeClass on pytest.ini. Thanks davidszotten for the PR (1952).

fix 2013_: turn RecordedWarning into namedtuple, to give it a comprehensible repr while preventing unwarranted modification.

fix 2208_: ensure a iteration limit for _pytest.compat.get_realfunc. Thanks RonnyPfannschmidt for the report and PR.

Hooks are now verified after collection is complete, rather than right after loading installed plugins. This makes it easy to write hooks for plugins which will be loaded during collection, for example using the pytest_plugins special variable (1821). Thanks nicoddemus for the PR.

Modify pytest_make_parametrize_id() hook to accept argname as an additional parameter. Thanks unsignedint_ for the PR.

Add venv to the default norecursedirs setting. Thanks The-Compiler_ for the PR.

PluginManager.import_plugin now accepts unicode plugin names in Python 2. Thanks reutsharabani_ for the PR.

fix 2308: When using both --lf and --ff, only the last failed tests are run. Thanks ojii for the PR.

Replace minor/patch level version numbers in the documentation with placeholders. This significantly reduces change-noise as different contributors regnerate the documentation on different platforms. Thanks RonnyPfannschmidt_ for the PR.

fix 2391_: consider pytestplugins on all plugin modules Thanks RonnyPfannschmidt for the PR.

Bug Fixes

Fix AttributeError on sys.stdout.buffer / sys.stderr.buffer while using capsys fixture in python 3. (1407). Thanks to asottile.

Change capture.py's DontReadFromInput class to throw io.UnsupportedOperation errors rather than ValueErrors in the fileno method (2276). Thanks metasyn and vlad-dragos_ for the PR.

Fix exception formatting while importing modules when the exception message contains non-ascii characters (2336). Thanks fabioz for the report and nicoddemus_ for the PR.

Added documentation related to issue (1937) Thanks skylarjhdownes for the PR.

Allow collecting files with any file extension as Python modules (2369). Thanks Kodiologist for the PR.

Show the correct error message when collect "parametrize" func with wrong args (2383). Thanks The-Compiler for the report and robin0371_ for the PR.

.. _davidszotten: https://github.com/davidszotten .. _fabioz: https://github.com/fabioz .. _fogo: https://github.com/fogo .. _fushi: https://github.com/fushi .. _Kodiologist: https://github.com/Kodiologist .. _Kriechi: https://github.com/Kriechi .. _mandeep: https://github.com/mandeep .. _mattduck: https://github.com/mattduck .. _metasyn: https://github.com/metasyn .. _MichalTHEDUDE: https://github.com/MichalTHEDUDE .. _ojii: https://github.com/ojii .. _reutsharabani: https://github.com/reutsharabani .. _robin0371: https://github.com/robin0371 .. _skylarjhdownes: https://github.com/skylarjhdownes .. _unsignedint: https://github.com/unsignedint .. _wheerd: https://github.com/wheerd

.. _1407: https://github.com/pytest-dev/pytest/issues/1407 .. _1512: https://github.com/pytest-dev/pytest/issues/1512 .. _1821: https://github.com/pytest-dev/pytest/issues/1821 .. _1874: https://github.com/pytest-dev/pytest/pull/1874 .. _1937: https://github.com/pytest-dev/pytest/issues/1937 .. _1952: https://github.com/pytest-dev/pytest/pull/1952 .. _2007: https://github.com/pytest-dev/pytest/issues/2007 .. _2013: https://github.com/pytest-dev/pytest/issues/2013 .. _2101: https://github.com/pytest-dev/pytest/pull/2101 .. _2166: https://github.com/pytest-dev/pytest/pull/2166 .. _2208: https://github.com/pytest-dev/pytest/issues/2208 .. _2228: https://github.com/pytest-dev/pytest/issues/2228 .. _2276: https://github.com/pytest-dev/pytest/issues/2276 .. _2308: https://github.com/pytest-dev/pytest/issues/2308 .. _2336: https://github.com/pytest-dev/pytest/issues/2336 .. _2369: https://github.com/pytest-dev/pytest/issues/2369 .. _2383: https://github.com/pytest-dev/pytest/issues/2383 .. _2391: https://github.com/pytest-dev/pytest/issues/2391 .. _533: https://github.com/pytest-dev/pytest/issues/533

That's it for now!

Happy merging! 🤖

dssg / collate