duartegroup / autodE

automated reaction profile generation
https://duartegroup.github.io/autodE/
MIT License
173 stars 52 forks source link

Add option to change xTB parameterisation version and temperature #252

Closed shoubhikraj closed 1 year ago

shoubhikraj commented 1 year ago

Adds options to change the xTB --etemp and --gfn flags from Config. Default values (None) prevent use of those flags.


Checklist

codecov[bot] commented 1 year ago

Codecov Report

Merging #252 (d251e28) into v1.4.0 (5f355e7) will decrease coverage by 0.08%. The diff coverage is 97.37%.

@@            Coverage Diff             @@
##           v1.4.0     #252      +/-   ##
==========================================
- Coverage   97.34%   97.26%   -0.08%     
==========================================
  Files         195      195              
  Lines       20410    20417       +7     
==========================================
- Hits        19868    19859       -9     
- Misses        542      558      +16     
Flag Coverage Δ
unittests 97.26% <97.37%> (-0.08%) :arrow_down:

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
autode/calculations/calculation.py 99.11% <ø> (-0.21%) :arrow_down:
autode/transition_states/transition_state.py 74.67% <22.22%> (ø)
autode/neb/original.py 95.97% <96.96%> (-1.73%) :arrow_down:
autode/__init__.py 100.00% <100.00%> (ø)
autode/config.py 100.00% <100.00%> (ø)
autode/constraints.py 98.78% <100.00%> (+0.07%) :arrow_up:
autode/neb/ci.py 82.60% <100.00%> (-1.84%) :arrow_down:
autode/neb/idpp.py 100.00% <100.00%> (ø)
autode/neb/neb.py 100.00% <100.00%> (ø)
autode/opt/optimisers/dimer.py 98.03% <100.00%> (-0.02%) :arrow_down:
... and 22 more

... and 4 files with indirect coverage changes

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shoubhikraj commented 1 year ago

@t-young31 Could you please merge the PR (I don't have merge access)?

t-young31 commented 1 year ago

please let me know if you want permissions so you can merge it yourself!

shoubhikraj commented 1 year ago

@t-young31 Maybe later, when I get used to github a little bit more 😅