durack1 / Roethigetal21NatClimChg

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Higher resolution seagrass fields #3

Open durack1 opened 1 year ago

durack1 commented 1 year ago

There is a need to create higher (~0.1deg) resolution data for the seagrass, near-coastal locations. These will need to be defined, so if they can be included below, ideal:

See https://github.com/durack1/Roethigetal21NatClimChg/blob/main/readNcWriteAsc.py#L200-L212

ping @lauradomar

durack1 commented 1 year ago

@lauradomar, I'll await these new location deets before prepping the next round of data

LauraMWarmuth commented 1 year ago

@durack1 The maximum extent limits for the seagrass groups are (format: max lat, max lon, min lat, min lon):

-9, 160, -46, 113

We could just add a boundary around that to add a few degrees either side as previously I think?

Let me know of any questions and thanks! Laura

durack1 commented 1 year ago

@lauradomar here is a first attempt at infilling

Native output 230419T110609_seagrass-Aust

Zonally infilled output 230419T110609_seagrass-Aust-lonInfilled

I am unfamiliar with the subregions that are the focus, so it would be great to know where these seagrass beds lie, so we can ascertain that the infilling is providing a useable and representative field (e.g. the top of Australia and Gulf of Carpentaria is not usable for this infill method)

durack1 commented 1 year ago

@lauradomar just pinging you on this, so we can get these fields finalized and prepped for model runs

durack1 commented 1 year ago

@lauradomar just pinging you here, I am yet to provide you data, so we better get on with this!

LauraMWarmuth commented 1 year ago

Thanks! Sorry, had deadlines and long holiday weekend. Here the info: The maximum extent limits for the seagrass groups are (format: max lat, max lon, min lat, min lon):

-9, 160, -46, 113

The different individual extents for the genera are:

-9, 160, -44, 113 (Halophila)

-9, 160, -46, 114 (Zostera)

-25, 153, -44, 113 (Posidonia)

-9, 149, -22, 114 (Thalassia)

-9, 147, -20, 130 (Enhalus)

We could just drop the ones that are in the North if the data would not be usable? The output otherwise looks good, I would just need to have the land based on your map removed like before so only cells in the ocean would have values that are put into the model.

durack1 commented 1 year ago

@lauradomar wow, these regions are far more expansive than I would have assumed, I thought we'd be constraining to tight coastal boxes in representative zones, rather than a box that includes the whole of Australia for e.g. - red box. 230511T144506_seagrass-Aust-lonInfilled red - full extent blue - Halophila black - Zostera white - Posidonia magenta - Thalassia yellow - Enhalus

By eyeball, if we constrained the data usage South of 15deg S, then I think we could get away with it. My intention would be to provide the complete infilled array, as I had presumed you'd be cookie cutting out small boxes where the seagrass beds are, not Aust-wide regions. This doesn't seem to be the use case that you have in mind.