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dvera / albacore

Dockerfile for the Albacore basecaller from Oxford Nanopore
GNU General Public License v3.0
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Empty results #6

Open yuxinPenny opened 3 years ago

yuxinPenny commented 3 years ago

I use the albacore the call the fast5 file. However the resulting workspace file was empty.

Here is the linux shell: read_fast5_basecaller.py -i /home/yuxin/home/yuxin/Nanopore/DATA/HEK293_shMETTL3/fast5 -r -t 5 -f FLO-MIN107 --k SQK-RNA001 -s /home/yuxin/home/yuxin/Nanopore/DATA/HEK293_shMETTL3/fastq | 278 of 278|################################################|100% Time: 0:00:00