dviraran / SingleR

SingleR: Single-cell RNA-seq cell types Recognition (legacy version)
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Error when running SingleR.combine #81

Open anyone1985 opened 5 years ago

anyone1985 commented 5 years ago

When I combine a list of multiple SingleR object, some error come up:

singler = SingleR.Combine(singler.objects, order = colnames(x = all)) Error: $ operator is invalid for atomic vectors

I guest this bug may relate to the different versions of Seurat.

sessionInfo() R version 3.5.1 (2018-07-02) Platform: x86_64-conda_cos6-linux-gnu (64-bit) Running under: Ubuntu 16.04.6 LTS

Matrix products: default BLAS/LAPACK: /home/dragon/Database/miniconda2/lib/R/lib/libRblas.so

locale: [1] C

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] SingleR_1.0.1 Seurat_3.0.2