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dyerlab / gstudio

An R package for the spatial analysis of population genetic data.
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Update read_population.R #9

Closed stranda closed 4 years ago

stranda commented 4 years ago

Hi Rodney,

we are looking at using gstudio and popgraph in a large number of simulations running on a parallel machine. We were writing files to disk and rereading using read_population. To avoid file name collisions for simultaneous jobs, we were looking into using textConnections to provide input for read_population.

Unfortunately the first thing read_population does is check for file and directory existence. I changed the source to check for textconnections first and then if it is not a textConnection, perform the file.exist tests that you already implemented.

This pull request has the new changes to read_population.R

dyerlab commented 4 years ago

Got it!

stranda commented 4 years ago

Thanks!

On Thu, Mar 19, 2020 at 3:36 PM Rodney J. Dyer notifications@github.com wrote:

Got it!

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