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dynverse
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dynbenchmark
Comparison of methods for trajectory inference on single-cell data 🥇
https://doi.org/10.1101/276907
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HOW to use "evaluate_ti_method" ??
#40
noob000007
opened
10 months ago
0
Cannot install dynbenchmark using: devtools::install_github("dynverse/dynbenchmark/package")
#39
noobCoding
closed
1 year ago
2
Add vector of root cells
#37
TarekGharsalli
opened
2 years ago
0
Synthetic dataset code
#36
onahman
closed
3 years ago
1
Error in devtools::install_github("dynverse/dynbenchmark/package")
#35
pablommesas
closed
4 years ago
2
definitions of trajectory types
#34
ShobiStassen
closed
4 years ago
1
Support for SLURM or Linux Server
#33
blanka-kirby
opened
5 years ago
0
Error: `id` must evaluate to column positions or names, not a function
#32
pablommesas
opened
5 years ago
0
Version number bumping for dyno 1.0.0 release
#31
rcannood
closed
5 years ago
2
Failed Installation - Error : object ‘get_platform_from_counts’ is not exported by 'namespace:dyngen'
#30
pablommesas
closed
5 years ago
2
Will you keep updating on new methods?
#29
YubinXie
closed
5 years ago
4
Update gource + update link to paper
#28
zouter
closed
5 years ago
1
Update results READMEs
#27
zouter
closed
5 years ago
0
Add results for each experiment
#26
zouter
closed
5 years ago
1
Devel
#25
zouter
closed
5 years ago
0
install_github("dynverse/dynbenchmark") not working
#24
blancha
closed
5 years ago
1
Update paper
#23
zouter
closed
5 years ago
1
Devel
#22
rcannood
closed
5 years ago
2
Devel
#21
rcannood
closed
6 years ago
1
Update results & paper
#20
zouter
closed
6 years ago
1
Updated on scalability + stability + benchmark interpretation + readmes + overview figure
#19
zouter
closed
6 years ago
1
Updates on all levels
#18
zouter
closed
6 years ago
1
Updates to benchmarking pipeline + manuscript + figures
#17
zouter
closed
6 years ago
0
A lot of cleanup + add stability results + add metadata on datasets + characterise datasets
#16
zouter
closed
6 years ago
0
Updates of all experiments
#15
zouter
closed
6 years ago
0
reverse pr
#14
rcannood
closed
6 years ago
0
Updates to metric conformity + move scripts + updates to README
#13
zouter
closed
6 years ago
0
put QC results into results/ instead of derived/
#12
rcannood
closed
6 years ago
1
Several additions to repo documentation
#11
zouter
closed
6 years ago
1
Update a lot of READMEs :)
#10
zouter
closed
6 years ago
1
Devel
#9
rcannood
closed
6 years ago
2
Updates to benchmarking + README + several additions and fixes for dataset generation
#8
zouter
closed
6 years ago
0
Adapt benchmarking suite + add automated testing
#7
zouter
closed
6 years ago
2
Complete restructuring of package and code, fix real dataset generation
#6
zouter
closed
6 years ago
1
Feature/reorganise structure
#5
rcannood
closed
6 years ago
1
Rename PRISM to qsub
#4
zouter
closed
6 years ago
0
Large cleanup
#3
rcannood
closed
6 years ago
0
Feature/cleanup analysis
#2
rcannood
closed
6 years ago
0
Merge devel to master
#1
rcannood
closed
6 years ago
0