search

dynverse / dynmethods

A collection of 50+ trajectory inference methods within a common interface 📥📤
https://dynverse.org
Other
118 stars 26 forks source link

Oscope #155

Open ramiromagno opened 5 years ago

ramiromagno commented 5 years ago

What about Oscope?

https://bioconductor.org/packages/release/bioc/html/Oscope.html

rcannood commented 4 years ago

I created a ti_oscope repository but I'm having some issues trying to run it on a broad range of datasets.

Perhaps @lengning can chime in on this. Could you have a look at run.R. Does this seem like a reasonable way to run oscope, provided I have a counts matrix?