msubramanian10
commented
3 years ago Solved issue by converting individual docker containers into singularity containers and running rstudio in that directory.
Closed msubramanian10 closed 3 years ago
msubramanian10
commented
3 years ago Solved issue by converting individual docker containers into singularity containers and running rstudio in that directory.
Hi!
I am running into the following error when running the documentation sample script on a HPC cluster.
Error: "Loading required namespace: akima Running singularity exec 'docker://dynverse/ti_slingshot:v1.0.3' echo hi Running /usr/bin/singularity exec --containall -B \ '/tmp/Rtmp5YSV1P/file193e3557c3ab/:/copy_mount,/tmp/Rtmp5YSV1P/file193e67b4237/tmp:/tmp2' \ 'docker://dynverse/ti_slingshot:v1.0.3' cp /code/definition.yml \ /copy_mount/ INFO: Using cached SIF image Execution halted"
Is there a way to fix this issue? Please let me know.
Thank you! I appreciate your time and reply!