Hi,
I have a matrix (from CyTOF data) with cell counts, UMAP coordinates and wishbone dimensions etc (attached sample file) from the previous analysis with OMIQ software.
Sample_Input.txt
I am using dynverse for the first time, I tried generating Trajectory using count matrix but couldn't get desired expression of cells along the Trajectory.
Now I want to Infer Trajectory through Slingshot and Wishbone using this matrix. Could you please tell me is there a way to directly use either UMAP coordinates or Wishbone dimension to infer Trajectory in dynverse.
Hi, I have a matrix (from CyTOF data) with cell counts, UMAP coordinates and wishbone dimensions etc (attached sample file) from the previous analysis with OMIQ software. Sample_Input.txt
I am using dynverse for the first time, I tried generating Trajectory using count matrix but couldn't get desired expression of cells along the Trajectory. Now I want to Infer Trajectory through Slingshot and Wishbone using this matrix. Could you please tell me is there a way to directly use either UMAP coordinates or Wishbone dimension to infer Trajectory in dynverse.
Thank you in advance.