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dynverse / dyno

Inferring, interpreting and visualising trajectories using a streamlined set of packages 🦕
https://dynverse.github.io/dyno
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Error in eval_tidy(enquo(var), var_env) : object 'method_id' not found #23

Closed ysu2015 closed 5 years ago

ysu2015 commented 5 years ago

Hi,

I met the error message when I run the tutorial code. "Error in eval_tidy(enquo(var), var_env) : object 'method_id' not found". Could you try to help me out? Thanks a lot.

the details show in below.

guidelines <- guidelines_shiny(dataset) Loading required package: shiny

Listening on http://0.0.0.0:3209 Code to reproduce the guidelines, copy it over to your script!

Reproduces the guidelines as created in the shiny app

answers <- dynguidelines::answer_questions( multiple_disconnected = NULL, expect_topology = NULL, expected_topology = NULL, n_cells = 392, n_features = 2000, prior_information = NULL ) guidelines <- dynguidelines::guidelines(answers = answers)

methods <- guidelines$methods %>% filter(selected) %>% pull(method_id) %>% first() Error in eval_tidy(enquo(var), var_env) : object 'method_id' not found

zouter commented 5 years ago

Hi! This was some old code in the readme. The correct way to get the methods is by using methods <- guidelines$methods_selected this is now updated in the readme

Thanks

ysu2015 commented 5 years ago

Got it. Thanks a lot. Y