Error Message: "Warning: Error in : Column `start_n` not found 128: <Anonymous>"

[svoter]

Hello, I tried running the following code from your tutorial:

library(dyno) library(tidyverse) data("fibroblast_reprogramming_treutlein") dim(fibroblast_reprogramming_treutlein$expression) task <- wrap_expression( counts = fibroblast_reprogramming_treutlein$counts, expression = fibroblast_reprogramming_treutlein$expression) guidelines <- guidelines_shiny(task)

The shiny app will launch, but when I try clicking the "Use Methods" button, I get the following error message: "Warning: Error in : Column start_n not found 128: " and then the window closes.

Do you have any suggestions?

Thank you, Sarah

[zouter]

Hi, thanks for trying out the package!

I found the probable cause of the error, and tried to fix it in dynverse/dynguidelines#1. Could you try reinstalling the package using devtools::install_github("dynverse/dynguidelines") and see if the error is still there?

Wouter

[svoter]

It's working now! Thanks for the quick response

[ysu2015]

Hi zouter, when I run the commands in the tutorial, I got another error. library(dyno) library(tidyverse) data("fibroblast_reprogramming_treutlein") dim(fibroblast_reprogramming_treutlein$expression) task <- wrap_expression( counts = fibroblast_reprogramming_treutlein$counts, expression = fibroblast_reprogramming_treutlein$expression) guidelines <- guidelines_shiny(task)

Error in setdiff(names(questions), given_question_ids) : object 'questions' not found

[rcannood]

Hi @ysu2015,

I moved your question to a separate issue, to make sure we don't lose track of it. Check #21 for updates.

Robrecht