Closed Singsing999 closed 3 years ago
library(dyno) Loading required package: dynfeature Loading required package: dynguidelines Loading required package: dynmethods Loading required package: dynplot Loading required package: dynwrap library(tidyverse) -- Attaching packages ----------------------------- tidyverse 1.3.0 -- √ ggplot2 3.3.2 √ purrr 0.3.4 √ tibble 3.0.3 √ dplyr 1.0.2 √ tidyr 1.1.2 √ stringr 1.4.0 √ readr 1.4.0 √ forcats 0.5.0 -- Conflicts -------------------------------- tidyverse_conflicts() -- x dplyr::filter() masks stats::filter() x dplyr::lag() masks stats::lag() Warning messages: 1: package ‘tidyverse’ was built under R version 4.0.3 2: package ‘forcats’ was built under R version 4.0.3 dataset <- wrap_expression( counts = example_dataset$counts, expression = example_dataset$expression ) model <- infer_trajectory(dataset, ti_comp1()) model Error: object 'model' not found
library(dyno) Loading required package: dynfeature Loading required package: dynguidelines Loading required package: dynmethods Loading required package: dynplot Loading required package: dynwrap library(tidyverse) -- Attaching packages ----------------------------- tidyverse 1.3.0 -- √ ggplot2 3.3.2 √ purrr 0.3.4 √ tibble 3.0.3 √ dplyr 1.0.2 √ tidyr 1.1.2 √ stringr 1.4.0 √ readr 1.4.0 √ forcats 0.5.0 -- Conflicts -------------------------------- tidyverse_conflicts() -- x dplyr::filter() masks stats::filter() x dplyr::lag() masks stats::lag() Warning messages: 1: package ‘tidyverse’ was built under R version 4.0.3 2: package ‘forcats’ was built under R version 4.0.3 dataset <- wrap_expression(
model Error: object 'model' not found
I run the example follow https://dynverse.org/users/3-user-guide/3-running/
Here is the content in the tmp file:
Loading required namespace: hdf5r Failed with error: ‘there is no package called ‘hdf5r’’ Error in value[3L] : Error produced in dynwrap input/output: there is no package called ‘hdf5r’
I run the example follow https://dynverse.org/users/3-user-guide/3-running/
Here is the content in the tmp file:
Loading required namespace: hdf5r Failed with error: ‘there is no package called ‘hdf5r’’ Error in value[3L] : Error produced in dynwrap input/output: there is no package called ‘hdf5r’