Open kverstae opened 5 years ago
File "/code/run.py", line 52, in <module> mute = True File "/pCreode/pcreode/functions.py", line 698, in pCreode hi_pl, hi_pl_ind = hierarchical_placement( dens_knn, cen_ind) File "/pCreode/pcreode/functions.py", line 284, in hierarchical_placement run_dist = get_graph_distance( end_ind, to_ind, graph) File "/pCreode/pcreode/functions.py", line 120, in get_graph_distance d[ii,:] = graph.shortest_paths( from_ind[ii], to_ind, weights="weight")[0] igraph._igraph.InternalError: Error at structural_properties.c:5200: cannot run Bellman-Ford algorithm, Negative loop detected while calculating shortest paths```
Thanks for letting me know.... Too much trouble to get a copy of the data set that flagged this error? Would like to try and reproduce.