Closed aremazeilles closed 3 years ago
I don't really understand why not all PIs are in the excel template. In the last version that I saw, there were both muscle synergies PIs and spinal maps PIs. But your indicator list contains only muscle synergies PIs.
Please check the excel, if there really are not all PIs, we will send the latest version again.
I am looking at file: https://docs.google.com/spreadsheets/d/19HB6j2O9O_58Vs_J8xOiOlo_4o82bRgQ/edit#gid=1788698095
I effectively see more PI, my mistakes:
muscle_synergy_number
emg_reconstruction_quality
pattern_fwhm
pattern_coa
muscle_module_similarity
matching_standard_reference_index
motor_pool_max_activation_timing
motor_pool_fwhm
motor_pool_coactivation
motor_pool_similarity
10 PIs. But the generated files are 11:
╭─anthony@PRT0962AL ~/code/eurobench/pepato ‹octave_version*›
╰─$ ls output
subject_0_run_0_emg_reco_quality.yaml
subject_0_run_0_matching_standard_reference_index.yaml
subject_0_run_0_motor_pool_coact_index.yaml
subject_0_run_0_motor_pool_fwhm.yaml
subject_0_run_0_motor_pool_max_activation.yaml
subject_0_run_0_motor_pool_similarity.yaml
subject_0_run_0_muscle_synergy_number.yaml
subject_0_run_0_pattern_coa.yaml
subject_0_run_0_pattern_fwhm.yaml
subject_0_run_0_patterns_similarity.yaml
subject_0_run_0_synergies_similarity.yaml
If I look for correspondance yaml file -> PI name, I get:
subject_0_run_0_emg_reco_quality.yaml: emg_reconstruction_quality
subject_0_run_0_matching_standard_reference_index.yaml: matching_standard_reference_index
subject_0_run_0_motor_pool_coact_index.yaml: motor_pool_coactivation
subject_0_run_0_motor_pool_fwhm.yaml: motor_pool_fwhm
subject_0_run_0_motor_pool_max_activation.yaml: motor_pool_max_activation_timing
subject_0_run_0_motor_pool_similarity.yaml: motor_pool_similarity
subject_0_run_0_muscle_synergy_number.yaml: muscle_synergy_number
subject_0_run_0_pattern_coa.yaml: pattern_coa
subject_0_run_0_pattern_fwhm.yaml: pattern_fwhm
subject_0_run_0_patterns_similarity.yaml:
subject_0_run_0_synergies_similarity.yaml:
# PI named muscle_module_similarity unasigned to a yaml file
So I have the impression the two last yaml files are not associated to a PI from the excel sheet, and I don't see the to which file the PI named muscle_module_similarity
should be assigned to.
I'm sorry, really Google doc has not been updated, now it is fixed.
And you are right, we decided to split PI muscle_module_similarity
into two Pis: patterns_similarity
and synergies_similarity
.
Looking at the generated PI, we see 11 files:
The excel template sheet only contain 6:
Could you update the template sheet with the missing PI?
@alfonsotecnalia is it ok to have
subject_0_run_0
at the beginning of the PI file names?