e-bel / ebel

Software package for parsing and validating Biological Expresison Language files as well as constructing and enriching knowledge graphs in the OrientDB environment.
MIT License
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NCBI import fails #17

Closed cebel closed 1 year ago

cebel commented 1 year ago

File "/usr/local/lib/python3.9/site-packages/ebel/manager/orientdb/biodbs/ncbi.py", line 231, in _insert_info_xref df[['db', 'dbid']] = df['db_xrefs'].str.split(':', 1, expand=True) File "/usr/local/lib/python3.9/site-packages/pandas/core/strings/accessor.py", line 136, in wrapper return func(self, *args, **kwargs) TypeError: split() takes from 1 to 2 positional arguments but 3 positional arguments (and 1 keyword-only argument) were given