GWASCatalog import fails

e-bel / ebel

Software package for parsing and validating Biological Expresison Language files as well as constructing and enriching knowledge graphs in the OrientDB environment.

MIT License

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GWASCatalog import fails #2

Closed cebel closed 3 years ago

cebel commented 3 years ago

ebel/manager/orientdb/biodbs/gwas_catalog.py", line 52, in insert_data

df = pd.read_csv(get_file_path(self.urls[self.biodb_name], self.biodb_name), sep="\t", low_memory=False)