This is CASA eMERLIN pipeline to calibrate data from the e-MERLIN array. Please fork the repository before making any changes and read the Coding Practices page in the wiki. Please add issues with the pipeline in the issues tab.
2017-10-12 13:32:03 | INFO | Running AOFLagger for field 1407+284 (0) using strategy pipeline/aoflagger_strategies/default/1407+284.rfis
sh: aoflagger: command not found
But then the pipeline continues with the rest of things. I think that an exception should be raised in case some part of the desired tasklist cannot be run, and the script should halt at that point.
2017-10-12 13:32:03 | INFO | Running AOFLagger for field 1407+284 (0) using strategy pipeline/aoflagger_strategies/default/1407+284.rfis sh: aoflagger: command not found
But then the pipeline continues with the rest of things. I think that an exception should be raised in case some part of the desired tasklist cannot be run, and the script should halt at that point.