varenius
commented
6 years ago There are actually two errors here: 1) The source names are not translated from e.g. OQ208 to 1407+284. 2) The source names seem to be splitted by letter instead of "comma", since the list logged to process seems to be "Fields: 1,5,1,6,+,1,9,3,2,,,1,4,0,7,+,2,8,4,,,0,3,1,9,+,4,1,5,,,1,5,3,2,+,2,3,4,4,,,1,3,3,1,+,3,0,5,,,1,5,3,4,+,2,3,3,0"
2017-11-04 10:57:36 | INFO | Starting pipeline 2017-11-04 10:57:36 | INFO | Running pipeline from: pipeline/ 2017-11-04 10:57:36 | INFO | Pipeline version: v0.6.1 2017-11-04 10:57:36 | INFO | Using github branch: master 2017-11-04 10:57:36 | INFO | github last commit: ad51f0d 2017-11-04 10:57:36 | INFO | This log uses UTC times 2017-11-04 10:57:36 | INFO | Inputs from file: inputs.txt 2017-11-04 10:57:36 | INFO | Parameters in inputs file: 2017-11-04 10:57:36 | INFO | fits_path : ./fitsidi/ 2017-11-04 10:57:36 | INFO | inbase : TSARP220_C_20171013 2017-11-04 10:57:36 | INFO | targets : 1534+2330 2017-11-04 10:57:36 | INFO | phscals : 1532+2344,1516+1932 2017-11-04 10:57:36 | INFO | fluxcal : 3C286 2017-11-04 10:57:36 | INFO | bpcal : OQ208 2017-11-04 10:57:36 | INFO | ptcal : 3C84 2017-11-04 10:57:36 | INFO | refant : Mk2 2017-11-04 10:57:36 | INFO | Lo_dropout_scans: 2017-11-04 10:57:36 | INFO | manual_flags_a : ./inputfg_a.flags 2017-11-04 10:57:36 | INFO | manual_flags_b : ./inputfg_b_avg.flags 2017-11-04 10:57:36 | INFO | run_importfits : 0 2017-11-04 10:57:36 | INFO | summary_weblog : 0 2017-11-04 10:57:36 | INFO | hanning : 0 2017-11-04 10:57:36 | INFO | ms2mms : 0 2017-11-04 10:57:36 | INFO | flag_0_aoflagger: 0 2017-11-04 10:57:36 | INFO | flag_1_apriori : 0 2017-11-04 10:57:36 | INFO | flag_2a_manual : 0 2017-11-04 10:57:36 | INFO | average_1 : 1 2017-11-04 10:57:36 | INFO | plot_data : 0 2017-11-04 10:57:36 | INFO | flag_2b_manual : 0 2017-11-04 10:57:36 | INFO | init_models : 0 2017-11-04 10:57:36 | INFO | bandpass_0 : 0 2017-11-04 10:57:36 | INFO | flag_3_tfcropBP : 0 2017-11-04 10:57:36 | INFO | delay : 0 2017-11-04 10:57:36 | INFO | gain_0_p_ap : 0 2017-11-04 10:57:36 | INFO | fluxscale : 0 2017-11-04 10:57:36 | INFO | bandpass_1_sp : 0 2017-11-04 10:57:36 | INFO | gain_1_amp_sp : 0 2017-11-04 10:57:36 | INFO | applycal_all : 0 2017-11-04 10:57:36 | INFO | flag_4_rflag : 0 2017-11-04 10:57:36 | INFO | plot_corrected : 0 2017-11-04 10:57:36 | INFO | weblog : 0 2017-11-04 10:57:36 | INFO | Loaded previous flags list from: ./flags.pkl 2017-11-04 10:57:36 | INFO | Targets: 1534+2330 2017-11-04 10:57:36 | INFO | Phasecals: 1532+2344,1516+1932 2017-11-04 10:57:36 | INFO | Fluxcal: 3C286 2017-11-04 10:57:36 | INFO | Bandpass: OQ208 2017-11-04 10:57:36 | INFO | Pointcal: 3C84 2017-11-04 10:57:36 | INFO | Start split 2017-11-04 10:57:37 | INFO | Sources in MS TSARP220_C_20171013.ms: 1516+1932,1407+284,0319+415,1532+2344,1331+305,1534+2330 2017-11-04 10:57:37 | WARNING | Fields 3C84,3C286,OQ208 not present in MS but listed in inputs file. 2017-11-04 10:57:37 | WARNING | All fields will be included in the averaged MS. 2017-11-04 10:57:37 | INFO | Input MS: TSARP220_C_20171013.ms 2017-11-04 10:57:37 | INFO | Output MS: TSARP220_C_20171013_avg.ms 2017-11-04 10:57:37 | INFO | width=4, timebin=2s 2017-11-04 10:57:37 | INFO | Fields: 1,5,1,6,+,1,9,3,2,,,1,4,0,7,+,2,8,4,,,0,3,1,9,+,4,1,5,,,1,5,3,2,+,2,3,4,4,,,1,3,3,1,+,3,0,5,,,1,5,3,4,+,2,3,3,0 2017-11-04 10:57:37 | INFO | Data column: data 2017-11-04 10:57:37 SEVERE mstransformer:: (file ../../tools/mstransformer/mstransformer_cmpt.cc, line 32)Exception Reported: Field Expression: No match found for name "+" 2017-11-04 10:57:37 SEVERE mstransformer:: (file ../../tools/mstransformer/mstransformer_cmpt.cc, line 32)+(near char. 9 in string "1,5,1,6,+,1,9,3,2,,,1,4,0,7,+,2,8,4,,,0,3,1,9,+,4,1,5,,,1,5,3,2,+,2,3,4,4,,,1,3,3,1,+,3,0,5,,,1,5,3,4,+,2,3,3,0") 2017-11-04 10:57:37 SEVERE ParallelDataHelper:::: Field Expression: No match found for name "+" 2017-11-04 10:57:37 SEVERE ParallelDataHelper::::+ (near char. 9 in string "1,5,1,6,+,1,9,3,2,,,1,4,0,7,+,2,8,4,,,0,3,1,9,+,4,1,5,,,1,5,3,2,+,2,3,4,4,,,1,3,3,1,+,3,0,5,,,1,5,3,4,+,2,3,3,0") 2017-11-04 10:57:37 WARN listobs::utils::verify Argument vis failed to verify. 2017-11-04 10:57:37 SEVERE listobs:::: An error occurred running task listobs. 2017-11-04 10:57:37 | INFO | Listobs file in: TSARP220_C_20171013_avg.ms.listobs 2017-11-04 10:57:37 | INFO | End split 2017-11-04 10:57:37 | INFO | Using MS file: TSARP220_C_20171013.ms 2017-11-04 10:57:37 | INFO | Loading msinfo from: TSARP220_C_20171013.ms.msinfo.pkl 2017-11-04 10:57:37 | INFO | Reading ms file information for MS: TSARP220_C_20171013.ms 2017-11-04 10:57:37 | INFO | Targets: 1534+2330 2017-11-04 10:57:37 | INFO | Phasecals: 1532+2344,1516+1932 2017-11-04 10:57:37 | INFO | Fluxcal: 3C286 2017-11-04 10:57:37 | INFO | Bandpass: OQ208 2017-11-04 10:57:37 | INFO | Pointcal: 3C84 2017-11-04 10:57:37 | INFO | Sources in MS TSARP220_C_20171013.ms: 1516+1932,1407+284,0319+415,1532+2344,1331+305,1534+2330 2017-11-04 10:57:38 | INFO | Antennas in MS TSARP220_C_20171013.ms: ['Cm' 'Da' 'De' 'Kn' 'Mk2' 'Pi'] 2017-11-04 10:57:41 | INFO | Elevation and uvcov plots will not be created again as long as the TSARP220_C_20171013.ms.msinfo.pkl file exists. 2017-11-04 10:57:41 | INFO | Pipeline finished 2017-11-04 10:57:41 | INFO | #################