The jupyter notebook for MIB data conversion has been re-arranged into a widget-based python script.
Without running cell by cell, all the process can be done step by step by running one cell to generate a set of widgets.
'MIB_convert.py' contains all necessary functions and a class for generating a set of widgets.
This generates a set of widgets to create a shell script file and a information text file, and to submit a slurm job.
'MIB_convert_submit.py' will be used to convert MIB files using slurm.
It reads the information file produced by 'MIB_convert.py'
'MIB_convert.ipynb' is for running a set of widgets from 'MIB_convert.py'.
When you want to convert mib files, you only need to run 'MIB_convert.ipynb'
Please make sure that the paths of 'MIB_convert.py' and 'MIB_convert_submit.py' are correct before using it.
The jupyter notebook for MIB data conversion has been re-arranged into a widget-based python script. Without running cell by cell, all the process can be done step by step by running one cell to generate a set of widgets.
'MIB_convert.py' contains all necessary functions and a class for generating a set of widgets. This generates a set of widgets to create a shell script file and a information text file, and to submit a slurm job. 'MIB_convert_submit.py' will be used to convert MIB files using slurm. It reads the information file produced by 'MIB_convert.py' 'MIB_convert.ipynb' is for running a set of widgets from 'MIB_convert.py'.
When you want to convert mib files, you only need to run 'MIB_convert.ipynb' Please make sure that the paths of 'MIB_convert.py' and 'MIB_convert_submit.py' are correct before using it.