eQTL-Catalogue / eQTL-SumStats

eQTL Catalogue Summary Statistics
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Develop a new data ingest / ETL pipeline for indexing eQTL data into the new mongo database. #88

Closed sprintell closed 1 week ago

karatugo commented 2 weeks ago

Issue Description

We need to develop a robust and scalable data ingest/ETL (Extract, Transform, Load) pipeline to facilitate the reading of eQTL (expression Quantitative Trait Loci) data from FTP sources, indexing it into a MongoDB database, and serving it via an API. This pipeline will ensure efficient data extraction, transformation, and retrieval to support downstream analysis and querying through a web service.

karatugo commented 1 week ago

Moved to https://github.com/EBISPOT/eqtl-sumstats-service/issues/3