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eQTL-Catalogue
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qtlmap
Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue
http://www.ebi.ac.uk/eqtl/
MIT License
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Empty files generated in the 'run_nominal' step
#19
isaartiga
opened
1 month ago
0
Write full SuSiE output for microarray and SomaLogic pQTL datasets
#18
kauralasoo
closed
1 year ago
0
The position field in finemapping results is double instead of integer
#17
kerimoff
closed
8 months ago
0
Modify connected component filtering code to export summary statistics for additional transcript-level QTLs
#16
kauralasoo
opened
2 years ago
0
Double check that median_tpm values are correctly added to the summary statistics files
#15
kauralasoo
closed
2 years ago
2
Filter by cc
#14
kerimoff
closed
2 years ago
0
extract_lead_cc_signal process optimisation
#13
kerimoff
opened
2 years ago
0
Incoprorate PEER factors as covariates in the analysis
#12
kauralasoo
opened
2 years ago
2
Update susieR to 0.11.42 to enable export of log Bayes factors for coloc v5
#11
kauralasoo
closed
2 years ago
0
small fixes for qtlmap dsl2
#10
kerimoff
closed
3 years ago
1
Update inputs_expl.md
#9
kerimoff
closed
3 years ago
0
Explain --varid_rsid_map_file in the documentation
#8
kauralasoo
opened
3 years ago
0
Make sure that the output files follow the exact same naming scheme as used by the eQTL Catalogue FTP.
#7
kauralasoo
closed
3 years ago
1
AN and AC fields are switched in the output files
#6
kauralasoo
closed
3 years ago
1
tx, txrev and exon summary statistics files have NAs in the median_tpm column
#5
kauralasoo
closed
3 years ago
1
Cgpu check travis
#4
cgpu
closed
4 years ago
1
Broken inputs_expl.md link in docs/usage.md
#3
allumik
closed
4 years ago
0
Produce an informative error message if more than one QTL group present after filtering.
#2
kauralasoo
opened
4 years ago
0
Duplicate rows in the fastQTL output?
#1
kauralasoo
closed
4 years ago
1