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eaasna / valik

Local sequence similarity search tool
BSD 3-Clause "New" or "Revised" License
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Find FNR for heuristic threshold #104

Closed eaasna closed 8 months ago

eaasna commented 9 months ago

Minimise the false negative and false positive rates to find a suitable k-mer length and heuristic threshold when searching for short alignment with a high error rate

codecov-commenter commented 9 months ago

Codecov Report

Attention: 8 lines in your changes are missing coverage. Please review.

Comparison is base (ccb9d8c) 81.37% compared to head (23af9c5) 77.77%. Report is 16 commits behind head on main.

Files Patch % Lines
include/utilities/consolidate/stellar_match.hpp 52.94% 8 Missing :warning:

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Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #104 +/- ## ========================================== - Coverage 81.37% 77.77% -3.60% ========================================== Files 3 3 Lines 102 117 +15 ========================================== + Hits 83 91 +8 - Misses 19 26 +7 ```

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