eaasna / valik

Local sequence similarity search tool
BSD 3-Clause "New" or "Revised" License
0 stars 3 forks source link

Call Stellar search functions #90

Closed eaasna closed 1 year ago

eaasna commented 1 year ago

This is the shared memory version of DREAM-Stellar that avoids reading the same sequence multiple times from disk

Commit order is displayed incorrectly because of rebase

codecov-commenter commented 1 year ago

Codecov Report

Patch coverage has no change and project coverage change: -15.54 :warning:

Comparison is base (a36c697) 80.59% compared to head (40502ed) 65.06%.

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Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #90 +/- ## =========================================== - Coverage 80.59% 65.06% -15.54% =========================================== Files 3 3 Lines 67 83 +16 =========================================== Hits 54 54 - Misses 13 29 +16 ``` | [Impacted Files](https://app.codecov.io/gh/eaasna/valik/pull/90?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Evelin+Aasna) | Coverage Δ | | |---|---|---| | [include/utilities/consolidate/stellar\_match.hpp](https://app.codecov.io/gh/eaasna/valik/pull/90?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Evelin+Aasna#diff-aW5jbHVkZS91dGlsaXRpZXMvY29uc29saWRhdGUvc3RlbGxhcl9tYXRjaC5ocHA=) | `30.43% <0.00%> (-69.57%)` | :arrow_down: | | [include/valik/index.hpp](https://app.codecov.io/gh/eaasna/valik/pull/90?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Evelin+Aasna#diff-aW5jbHVkZS92YWxpay9pbmRleC5ocHA=) | `88.88% <0.00%> (ø)` | |

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