eastgenomics / eggd_artemis

Creates download urls for files required and outpus in a text file to be shared with the scientists
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multqc report as optional input #18

Closed kjwinfield closed 5 months ago

kjwinfield commented 6 months ago

eggd_artemis finds the multiqc report by searching all the jobs in the project in which it is running, finding MultiQC jobs and then taking the report from the job. This means artemis can only be run in the same project where a MultiQC job has been run. It would be useful to have an optional input for a multiqc html report, so that artemis can be run in testing projects using data in 002 projects