v1.5.0 - find summary .txt file id

eastgenomics / eggd_artemis

Creates download urls for files required and outpus in a text file to be shared with the scientists

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Closed growland2 closed 1 week ago

growland2 commented 1 week ago

Added code to find summary text file by querying the output of eggd_athena stage of SNV reports workflow
Example job which completes successfully run with a now removed print statement to show contents of the SNV data dictionary. See in logs (or screenshot below) for the presence of summary text file ID within the data dict.

This change is

pep8speaks commented 1 week ago

Hello @growland2! Thanks for updating this PR. We checked the lines you've touched for PEP 8 issues, and found:

Line 103:80: E501 line too long (118 > 79 characters)