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eastgenomics
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eggd_artemis
Creates download urls for files required and outpus in a text file to be shared with the scientists
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GCNV-99 excel fun times
#5
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jethror1
closed
1 year ago
jethror1
commented
1 year ago
Changes
Changed to now output xlsx file with links to make scientists happy
Querying of DNAnexus now all in parallel with
concurrent.futures
- now takes between 2-4 minutes to run
Made excluded regions track for igv red
Example jobs:
SNV & CNV -
https://platform.dnanexus.com/projects/GJFBY1046FxB9j1G4jPPg3kV/monitor/job/GKgXZYQ46Fx23vy9PBgKK5KX
SNV only -
https://platform.dnanexus.com/projects/GJFBY1046FxB9j1G4jPPg3kV/monitor/job/GKgXZbj46Fx7J5ypF1F6q96Y
This change is
Changes
concurrent.futures
- now takes between 2-4 minutes to runExample jobs:
This change is