eastgenomics / eggd_dias_batch

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Mismatch in total samples run in summary report #199

Closed jethror1 closed 3 months ago

jethror1 commented 6 months ago

samples where they have research use for the test code get skipped, yey the number of samples processed in the manifest just records what is left after excluding (which is mildly misleading), would be better to switch to listing total samples parsed from manifest, total processed and list any that have been removed

jethror1 commented 6 months ago

fixed here: https://github.com/eastgenomics/eggd_dias_batch/tree/fix_%23199