Correctly handle absent values

eastgenomics / eggd_generate_variant_workbook

DNAnexus app for generating xlsx variant workbooks

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Correctly handle absent values #100

Closed jethror1 closed 2 years ago

jethror1 commented 2 years ago

Changes

Correctly handles absent (.) values for gnomAD, sets these to 0 and displays original value which allows logical sorting

Fixes https://github.com/eastgenomics/eggd_generate_workbook/issues/96
Closes https://github.com/eastgenomics/eggd_generate_workbook/issues/91

This change is

pep8speaks commented 2 years ago

Hello @jethror1! Thanks for updating this PR. We checked the lines you've touched for PEP 8 issues, and found:

In the file resources/home/dnanexus/generate_workbook/utils/excel.py:

Line 276:80: E501 line too long (80 > 79 characters) Line 278:80: E501 line too long (82 > 79 characters) Line 279:80: E501 line too long (84 > 79 characters)