easybuilders / easybuild-easyconfigs

A collection of easyconfig files that describe which software to build using which build options with EasyBuild.
https://easybuild.io
GNU General Public License v2.0
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{bio}[foss/2023a] CellOracle v0.18.0, velocyto v0.17.17, genomepy v0.16.1, ... #20803

Closed pavelToman closed 1 week ago

pavelToman commented 2 weeks ago

(created using eb --new-pr)

pavelToman commented 2 weeks ago

@boegelbot please test @ generoso

boegelbot commented 2 weeks ago

@pavelToman: Request for testing this PR well received on login1

PR test command 'EB_PR=20803 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_20803 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

Test results coming soon (I hope)...

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boegelbot commented 2 weeks ago

Test report by @boegelbot SUCCESS Build succeeded for 6 out of 6 (6 easyconfigs in total) cns1 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8 See https://gist.github.com/boegelbot/682d399efe2d108a8e14d84bba905383 for a full test report.

pavelToman commented 2 weeks ago

@boegelbot please test @ jsc-zen3

boegelbot commented 2 weeks ago

@pavelToman: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=20803 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_20803 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

Test results coming soon (I hope)...

*- notification for comment with ID 2163090693 processed* *Message to humans: this is just bookkeeping information for me, it is of no use to you (unless you think I have a bug, which I don't).*
boegelbot commented 2 weeks ago

Test report by @boegelbot SUCCESS Build succeeded for 6 out of 6 (6 easyconfigs in total) jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.4, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.18 See https://gist.github.com/boegelbot/1df61309ff55d1f59c82bb5eb222a5d1 for a full test report.

verdurin commented 1 week ago

Test report by @verdurin SUCCESS Build succeeded for 14 out of 14 (6 easyconfigs in total) easybuild-c7.novalocal - Linux CentOS Linux 7.9.2009, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8 See https://gist.github.com/verdurin/92a49891a96cf9bd084455b57eec856e for a full test report.

verdurin commented 1 week ago

Going in, thanks @pavelToman!