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EasyBuild is a software installation framework in Python that allows you to install software in a structured and robust way.
https://easybuild.io
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Fail to find installed easyconfig files when using distutils for installation #356

Closed itkovian closed 11 years ago

itkovian commented 11 years ago

There seem to be two issues here, the other issue is reported in https://github.com/hpcugent/easybuild-easyconfigs/issues/1 (@boegel: wrong reference?).

While the easyconfig files have been installed and were made available in the easybuild/easyconfig subdir in the PYTHONPATH, they are not picked up by the framework.

gengar1:~ $ export PYTHONPATH=/user/home/gent/vsc400/vsc40075/.local/lib/python2.7/site-packages/:/user/home/gent/vsc400/vsc40075/.local/
gengar1:~ $ echo $PYTHONPATH
/user/home/gent/vsc400/vsc40075/.local/lib/python2.7/site-packages/:/user/home/gent/vsc400/vsc40075/.local/
gengar1:~ $ eb bzip2 -ld
== 2012-11-25 15:44:47,624 main.main INFO Log initialized with name None version None to file None on host gengar1.gengar.os
== 2012-11-25 15:44:47,624 main.main INFO This is EasyBuild 1.0.1
== 2012-11-25 15:44:47,624 main.main INFO Failed to determine easyconfigs path for easybuild-easyconfigs package.
== 2012-11-25 15:44:47,624 main.main DEBUG No config file specified on command line, trying other options.
== 2012-11-25 15:44:47,625 main.main DEBUG Falling back to default config: /vscmnt/gent_gengar/_user_home_gent/vsc400/vsc40075/.local/lib/python2.7/site-packages/easybuild/easybuild_config.py
== 2012-11-25 15:44:47,627 main.easybuild_config INFO Logger started for easybuild_config.
== 2012-11-25 15:44:47,627 main.config INFO Extended MODULEPATH with module install path used by EasyBuild: /user/home/gent/vsc400/vsc40075/.local/easybuild/modules/all:/apps/gent/SL5/harpertown/modules/all:/apps/gent/gengar/harpertown/modules/all:/usr/share/Modules/modulefiles:/etc/modulefiles
== 2012-11-25 15:44:47,627 main.main DEBUG Paths: [('bzip2', False)]
== ERROR: Can't find path /vscmnt/gent_gengar/_user_home_gent/vsc400/vsc40075/bzip2

The problem seems to lie in main,py:

    # determine easybuild-easyconfigs package install path
    # we may need for the robot (default path), or for finding easyconfig files
    easyconfigs_pkg_base_path = os.path.join('easybuild', 'easyconfigs')
    easyconfigs_pkg_full_path = None
    for syspath in sys.path:
        tmppath = os.path.join(syspath, easyconfigs_pkg_base_path)
        log.debug("Checking %s for easyconfigs" % (tmppath))
        if os.path.basename(syspath).startswith('easybuild_easyconfigs') and os.path.exists(tmppath):
            easyconfigs_pkg_full_path = tmppath
            log.info("Found path for easyconfigs in Python search path: %s" % easyconfigs_pkg_full_path)
            break

There is no code unpacked in a egg directory, so easybuild_easyconfigs* does not exist.

However, even is we ignore this and the path is added and found, there still is a problem building e.g., bzip2, ending with

gengar1:~ $ eb bzip2-1.0.6-goalf-1.1.0-no-OFED.eb -ld
== 2012-11-25 15:58:42,984 main.main INFO Log initialized with name None version None to file None on host gengar1.gengar.os
== 2012-11-25 15:58:42,984 main.main INFO This is EasyBuild 1.0.1
== 2012-11-25 15:58:42,984 main.main DEBUG Checking /vscmnt/gent_gengar/_user_home_gent/vsc400/vsc40075/.local/lib/python2.7/site-packages/easybuild/easybuild/easyconfigs for easyconfigs
== 2012-11-25 15:58:42,985 main.main DEBUG Checking /user/home/gent/vsc400/vsc40075/.local/lib/python2.7/site-packages/easybuild/easyconfigs for easyconfigs
== 2012-11-25 15:58:42,985 main.main DEBUG Checking /user/home/gent/vsc400/vsc40075/.local/easybuild/easyconfigs for easyconfigs
== 2012-11-25 15:58:42,985 main.main INFO Found path for easyconfigs in Python search path: /user/home/gent/vsc400/vsc40075/.local/easybuild/easyconfigs
== 2012-11-25 15:58:42,985 main.main DEBUG No config file specified on command line, trying other options.
== 2012-11-25 15:58:42,986 main.main DEBUG Falling back to default config: /vscmnt/gent_gengar/_user_home_gent/vsc400/vsc40075/.local/lib/python2.7/site-packages/easybuild/easybuild_config.py
== 2012-11-25 15:58:42,989 main.easybuild_config INFO Logger started for easybuild_config.
== 2012-11-25 15:58:42,989 main.config INFO Extended MODULEPATH with module install path used by EasyBuild: /user/home/gent/vsc400/vsc40075/.local/easybuild/modules/all:/apps/gent/SL5/harpertown/modules/all:/apps/gent/gengar/harpertown/modules/all:/usr/share/Modules/modulefiles:/etc/modulefiles
== 2012-11-25 15:58:44,192 main.main INFO Found bzip2-1.0.6-goalf-1.1.0-no-OFED.eb in /user/home/gent/vsc400/vsc40075/.local/easybuild/easyconfigs: /user/home/gent/vsc400/vsc40075/.local/easybuild/easyconfigs/b/bzip2/bzip2-1.0.6-goalf-1.1.0-no-OFED.eb
== 2012-11-25 15:58:44,193 main.main DEBUG Paths: [('/user/home/gent/vsc400/vsc40075/.local/easybuild/easyconfigs/b/bzip2/bzip2-1.0.6-goalf-1.1.0-no-OFED.eb', False)]
== 2012-11-25 15:58:44,194 main.main DEBUG Processing easyconfig /user/home/gent/vsc400/vsc40075/.local/easybuild/easyconfigs/b/bzip2/bzip2-1.0.6-goalf-1.1.0-no-OFED.eb
== 2012-11-25 15:58:44,196 main.EasyConfig INFO Logger started for EasyConfig.
== 2012-11-25 15:58:44,197 main.EasyConfig INFO setting config option toolchain: value {'version': '1.1.0-no-OFED', 'name': 'goalf'}
== 2012-11-25 15:58:44,197 main.EasyConfig INFO setting config option name: value bzip2
== 2012-11-25 15:58:44,197 main.EasyConfig INFO setting config option sources: value ['bzip2-1.0.6.tar.gz']
== 2012-11-25 15:58:44,197 main.EasyConfig INFO setting config option version: value 1.0.6
== 2012-11-25 15:58:44,197 main.EasyConfig INFO setting config option source_urls: value ['http://www.bzip.org/1.0.6/']
== 2012-11-25 15:58:44,197 main.EasyConfig INFO setting config option toolchainopts: value {'pic': True}
== 2012-11-25 15:58:44,197 main.EasyConfig INFO setting config option homepage: value http://www.bzip.org/
== 2012-11-25 15:58:44,198 main.EasyConfig INFO setting config option description: value bzip2 is a freely available, patent free, high-quality data compressor. It typically
compresses files to within 10% to 15% of the best available techniques (the PPM family of statistical
compressors), whilst being around twice as fast at compression and six times faster at decompression.
== 2012-11-25 15:58:44,198 main.EasyConfig INFO Validating easy block
== 2012-11-25 15:58:44,198 main.EasyConfig INFO Checking OS dependencies
== 2012-11-25 15:58:44,198 main.EasyConfig INFO OS dependencies ok: []
== 2012-11-25 15:58:44,199 main.search_toolchain INFO Logger started for search_toolchain.
== 2012-11-25 15:58:44,258 main.search_toolchain DEBUG importing toolchain module easybuild.toolchains.dummy
== 2012-11-25 15:58:44,513 main.search_toolchain DEBUG importing toolchain module easybuild.toolchains.gcc
== 2012-11-25 15:58:44,598 main.search_toolchain DEBUG importing toolchain module easybuild.toolchains.gmpich2
== 2012-11-25 15:58:44,777 main.search_toolchain DEBUG importing toolchain module easybuild.toolchains.gmvapich2
== 2012-11-25 15:58:44,830 main.search_toolchain DEBUG importing toolchain module easybuild.toolchains.goalf
== 2012-11-25 15:58:45,263 main.search_toolchain DEBUG importing toolchain module easybuild.toolchains.gompi
== 2012-11-25 15:58:45,268 main.search_toolchain DEBUG importing toolchain module easybuild.toolchains.gqacml
== 2012-11-25 15:58:45,451 main.search_toolchain DEBUG importing toolchain module easybuild.toolchains.ictce
== 2012-11-25 15:58:45,570 main.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,570 main.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,570 main.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,570 main.search_toolchain DEBUG Adding Mpich2 to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,570 main.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,571 main.search_toolchain DEBUG Found constant MPICH2 ('MPICH2') in module easybuild.toolchains.mpi.mpich2, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,571 main.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,571 main.search_toolchain DEBUG Adding Mvapich2 to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,571 main.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,571 main.search_toolchain DEBUG Found constant MVAPICH2 ('MVAPICH2') in module easybuild.toolchains.mpi.mvapich2, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,571 main.search_toolchain DEBUG Adding Atlas to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,571 main.search_toolchain DEBUG Adding Blacs to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,571 main.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,572 main.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,572 main.search_toolchain DEBUG Adding OpenMPI to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,572 main.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,572 main.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,572 main.search_toolchain DEBUG Found constant OPENMPI ('OpenMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,572 main.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,572 main.search_toolchain DEBUG Adding OpenMPI to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,573 main.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,573 main.search_toolchain DEBUG Found constant OPENMPI ('OpenMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,573 main.search_toolchain DEBUG Adding Acml to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,573 main.search_toolchain DEBUG Adding Blacs to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,573 main.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,573 main.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,573 main.search_toolchain DEBUG Adding QLogicMPI to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,573 main.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,574 main.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.linalg.acml, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,574 main.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.linalg.acml, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,574 main.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,574 main.search_toolchain DEBUG Found constant QLOGICMPI ('QLogicMPI') in module easybuild.toolchains.mpi.qlogicmpi, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,574 main.search_toolchain DEBUG Adding IntelFFTW to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,574 main.search_toolchain DEBUG Adding IntelIccIfort to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,575 main.search_toolchain DEBUG Adding IntelMKL to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,575 main.search_toolchain DEBUG Adding IntelMPI to list of imported classes used for looking for constants
== 2012-11-25 15:58:45,575 main.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.compiler.inteliccifort, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,575 main.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,575 main.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,575 main.search_toolchain DEBUG Found constant INTELMPI ('IntelMPI') in module easybuild.toolchains.mpi.intelmpi, adding it to easybuild.tools.toolchain
== 2012-11-25 15:58:45,583 main.ToolchainOptions DEBUG _add_options: adding options {'precise': (False, 'High precision'), 'verbose': (False, 'Verbose output'), 'pic': (False, 'Use PIC'), 'static': (False, 'Build static library'), 'optarch': (True, 'Enable architecture optimizations'), 'veryloose': (False, 'Very loose precision'), 'strict': (False, 'Strict (highest) precision'), 'unroll': (False, 'Unroll loops'), 'lowopt': (False, 'Low compiler optimizations'), 'shared': (False, 'Build shared library'), 'opt': (False, 'High compiler optimizations'), 'i8': (False, 'Integers are 8 byte integers'), 'loose': (False, 'Loose precision'), 'cstd': (None, 'Specify C standard'), 'defaultprec': (False, 'Default precision'), 'openmp': (False, 'Enable OpenMP'), 'noopt': (False, 'Disable compiler optimizations'), 'packed-linker-options': (False, 'Pack the linker options as comma separated list'), 'r8': (False, 'Real is 8 byte real'), 'cciscxx': (False, 'Use CC as CXX'), '32bit': (False, 'Compile 32bit target'), 'debug': (False, 'Enable debug'), 'defaultopt': (False, 'Default compiler optimizations')}
== 2012-11-25 15:58:45,583 main.ToolchainOptions DEBUG _add_options: adding options {'f2c': (False, 'Generate code compatible with f2c and f77'), 'lto': (False, 'Enable Link Time Optimization'), 'loop': (False, 'Automatic loop parallellisation')}
== 2012-11-25 15:58:45,583 main.Goalf INFO _get_optimal_architecture: using march=native as optarch for Intel.
== 2012-11-25 15:58:45,584 main.Goalf DEBUG _compiler_init: compiler toolchainoptions {'precise': False, 'verbose': False, 'pic': False, 'static': False, 'optarch': True, 'veryloose': False, 'strict': False, 'unroll': False, 'lowopt': False, 'shared': False, 'opt': False, 'i8': False, 'loose': False, 'cstd': None, 'defaultprec': False, 'openmp': False, 'f2c': False, 'noopt': False, 'packed-linker-options': False, 'lto': False, 'r8': False, 'cciscxx': False, '32bit': False, 'debug': False, 'defaultopt': False, 'loop': False}
== 2012-11-25 15:58:45,584 main.ToolchainOptions DEBUG _add_options: adding options {'usempi': (False, 'Use MPI compiler as default compiler')}
== 2012-11-25 15:58:45,584 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICXX defined, but allowed
== 2012-11-25 15:58:45,584 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICF90 defined, but allowed
== 2012-11-25 15:58:45,584 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICF77 defined, but allowed
== 2012-11-25 15:58:45,584 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICC defined, but allowed
== 2012-11-25 15:58:45,584 main.Goalf DEBUG _set_mpi_options: all current options {'precise': False, 'verbose': False, 'pic': False, 'static': False, 'optarch': True, 'usempi': False, 'veryloose': False, 'strict': False, 'unroll': False, 'lowopt': False, 'shared': False, 'opt': False, 'i8': False, 'loose': False, 'cstd': None, 'defaultprec': False, 'openmp': False, 'f2c': False, 'noopt': False, 'packed-linker-options': False, 'lto': False, 'r8': False, 'cciscxx': False, '32bit': False, 'debug': False, 'defaultopt': False, 'loop': False}
== 2012-11-25 15:58:45,585 main.main DEBUG Adding toolchain ('goalf', '1.1.0-no-OFED') as dependency for app bzip2.
== 2012-11-25 15:58:45,586 main.Modules INFO Logger started for Modules.
== 2012-11-25 15:58:46,536 main.Modules DEBUG module available name 'bzip2' version '1.0.6-goalf-1.1.0-no-OFED' in /user/home/gent/vsc400/vsc40075/.local/easybuild/modules/all:/apps/gent/SL5/harpertown/modules/all:/apps/gent/gengar/harpertown/modules/all:/usr/share/Modules/modulefiles:/etc/modulefiles:/user/home/gent/vsc400/vsc40075/.local/easybuild/modules/all gave 0 answers: []
== 2012-11-25 15:58:46,536 main.main DEBUG bzip2 (version 1.0.6-goalf-1.1.0-no-OFED) is not installed yet, so retaining it
== 2012-11-25 15:58:46,536 main.main INFO resolving dependencies ...
== resolving dependencies ...
== 2012-11-25 15:58:46,537 main.Modules INFO Logger started for Modules.
== 2012-11-25 15:58:47,215 main.Modules DEBUG module available name '' version '' in None gave 900 answers: [('ABAQUS', '6.10.1-linux-x86_64'), ('ABAQUS', '6.11.0-linux-x86_64'), ('ABAQUS', '6.11.1-linux-x86_64'), ('ABINIT', '5.8.4-gmgfl-0.5.0'), ('ABINIT', '5.8.4-gmgfl-0.5.0-mpi'), ('ABINIT', '5.8.4-ictce-3.2.1.015.u1'), ('ABINIT', '5.8.4-ictce-3.2.1.015.u1-mpi'), ('ABySS', '1.2.5-ictce-4.0.4'), ('ABySS', '1.3.0-ictce-4.0.4'), ('ABySS', '1.3.2-ictce-4.0.4'), ('ADF', '2009.01a.pc64_linux.intelmpi'), ('ALLPATHS-LG', '41377-gimkl-0.5.2'), ('AMOS', '3.1.0-ictce-4.0.4'), ('AMOS', '3.1.0-ictce-4.0.6'), ('ARPACK', '96-gimkl-0.5.1'), ('ARPACK', '96-gimkl-0.5.2'), ('ARPACK', '96-gmgfl-0.5.0'), ('ARPACK', '96-ictce-3.2.1.015.u4'), ('ARPACK', '96-ictce-4.0.1'), ('ARPACK', '96-ictce-4.0.6'), ('ASE', '3.6.0.2515-ictce-4.0.6-Python-2.7.2'), ('ATSAS', '2.3.1-2.x86_64'), ('ATSAS', '2.4.1-4.sl5.x86_64'), ('AmberTools', '1.5-ictce-4.0.6'), ('Armadillo', '2.4.4-ictce-4.0.6-Python-2.7.3'), ('AutoDock-Vina', '1.1.1-ictce-3.2.1.015.u4'), ('Autoconf', '2.68-GCC-4.4.3'), ('Autoconf', '2.68-SL55_x86_64'), ('Aztec', '2.1-ictce-3.2.1.015.u4'), ('BEAGLE', '20110617-ictce-4.0.1'), ('BEAGLE', '20120124-ictce-4.0.6'), ('BEAST', '1.6.1'), ('BLACS', '1.1-GCC-4.4.1-MVAPICH2-1.4rc1-3378'), ('BLACS', '1.1-GCC-4.4.1-MVAPICH2-1.4rc1-3378-debug'), ('BLACS', '1.1-GCC-4.4.1-OpenMPI-1.3.3'), ('BLAST', '2.2.22-x64-linux'), ('BLAST', '2.2.25-x64-linux'), ('BLAST', 'ncbi-2.2.25-x64-linux'), ('BWA', '0.5.9-ictce-4.0.1'), ('BWA', '0.6.1-ictce-4.0.4'), ('BWA', '0.6.1-ictce-4.0.6'), ('BamTools', '1.0.2-ictce-4.0.6'), ('BiSearch', '20051222-ictce-4.0.4'), ('BigDFT', '1.2.0.2-gmgfl-0.5.0'), ('BigDFT', '1.2.0.2-gmgfl-0.5.0-mpi'), ('BigDFT', '1.2.0.2-ictce-3.2.1.015.u1'), ('BigDFT', '1.2.0.2-ictce-3.2.1.015.u1-mpi'), ('Biopython', '1.58-ictce-4.0.4'), ('Biopython', '1.58-ictce-4.0.6'), ('Bison', '2.5-ictce-4.0.10'), ('Bison', '2.5-ictce-4.0.6'), ('Blat', '34-ictce-4.0.4'), ('Blat', '34-ictce-4.0.6'), ('Blat', '35-ictce-4.0.6'), ('Blitz++', '0.9-gmgfl-0.5.0'), ('Blitz++', '0.9-ictce-3.2.1.015.u1'), ('Blitz++', '0.9-ictce-3.2.1.015.u4'), ('Blitz++', '0.9-ictce-4.0.6'), ('Boost', '1.43.0-ictce-3.2.1.015.u4'), ('Boost', '1.43.0-ictce-3.2.2.u3'), ('Boost', '1.43.0-ictce-4.0.1'), ('Boost', '1.45.0-ictce-4.0.0'), ('Boost', '1.47.0-ictce-4.0.1'), ('Boost', '1.47.0-ictce-4.0.4'), ('Boost', '1.48.0-ictce-4.0.4'), ('Boost', '1.49.0-ictce-4.0.6'), ('Boost', '1.49.0-ictce-4.0.6-Python-2.6.4'), ('Boost', '1.49.0-ictce-4.0.6-Python-2.7.3'), ('Bowtie', '0.12.7-ictce-4.0.0'), ('Bowtie', '0.12.7-ictce-4.0.1'), ('Bowtie', '0.12.7-ictce-4.0.4'), ('Bowtie', '0.12.7-ictce-4.0.6'), ('Bowtie', '2.0.0-beta5-ictce-4.0.6'), ('CAMFR', '20070717-ictce-3.2.1.015.u4'), ('CAPHE', '1.0.0-ictce-4.0.1'), ('CAPHE', '1.4.1-ictce-4.0.6'), ('CAPHE', '1.4.2-ictce-4.0.6'), ('CCfits', '2.4-ictce-4.0.6'), ('CD-HIT', '2009-0427-gimkl-0.5.1'), ('CD-HIT', '2009-0427-gimkl-0.5.1-omp'), ('CD-HIT', '4.5.5-2011-03-31-gimkl-0.5.1'), ('CD-HIT', '4.5.5-2011-03-31-ictce-4.0.4'), ('CFITSIO', '3.26-ictce-4.0.1'), ('CFITSIO', '3.28-ictce-4.0.1'), ('CFITSIO', '3.28-ictce-4.0.6'), ('CFITSIO', '3.29-ictce-4.0.6'), ('CGAL', '4.0-ictce-4.0.6-Python-2.7.3'), ('CLHEP', '2.0.4.2-ictce-3.2.1.015.u4'), ('CLHEP', '2.0.4.2-ictce-4.0.1'), ('CLHEP', '2.0.4.7-ictce-4.0.1'), ('CLHEP', '2.0.4.7-ictce-4.0.4'), ('CLHEP', '2.1.1.0-ictce-4.0.6'), ('CLHEP', '2.0.4.7-ictce-3.2.1.015.u4'), ('CLooG-PPL', '0.15.5-GCC-4.4.1-nocloogppl-buildgcc4.4.1'), ('CLooG-PPL', '0.15.9-GCC-4.4.3-nocloogppl'), ('CMake', '2.8.4'), ('CMake', '2.8.4-ictce-4.0.6'), ('COMSOL', '3.5.0.608'), ('COMSOL', '4.1.0.112'), ('COMSOL', '4.2.0.187'), ('COMSOL', '4.2a'), ('CP2K', '20090728-gmgfl-0.5.0'), ('CP2K', '20090728-gmgfl-0.5.0-noopt'), ('CP2K', '20090728-gmgfl-0.5.0-opt'), ('CP2K', '20090728-gmgfl-0.5.0-opt2'), ('CP2K', '20090909-gimkl-0.5.0-noopt'), ('CP2K', '20090909-gimkl-0.5.0-opt2'), ('CP2K', '20090909-gimkl-0.5.0-psmp-opt'), 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'7.0.23-ictce-4.0.10'), ('yasm', '1.2.0-ictce-4.0.6'), ('zlib', '1.2.3-gimkl-0.5.0'), ('zlib', '1.2.3-gmgfl-0.5.0'), ('zlib', '1.2.3-ictce-3.2.1.015.u1'), ('zlib', '1.2.4-gimkl-0.5.1'), ('zlib', '1.2.4-ictce-3.2.1.015.u4'), ('zlib', '1.2.4-ictce-3.2.2.u2'), ('zlib', '1.2.4-ictce-3.2.2.u3'), ('zlib', '1.2.5-ictce-4.0.0'), ('zlib', '1.2.5-ictce-4.0.1'), ('zlib', '1.2.5-ictce-4.0.4'), ('zlib', '1.2.5-ictce-4.0.6'), ('zlib', '1.2.7-ictce-4.0.10'), ('zlib', '1.2.7-ictce-4.0.6')]
== 2012-11-25 15:58:47,217 main.main DEBUG List of unresolved dependencies: [{'dependencies': [('goalf', '1.1.0-no-OFED')], 'unresolvedDependencies': [('goalf', '1.1.0-no-OFED')], 'spec': '/user/home/gent/vsc400/vsc40075/.local/easybuild/easyconfigs/b/bzip2/bzip2-1.0.6-goalf-1.1.0-no-OFED.eb', 'module': ('bzip2', '1.0.6-goalf-1.1.0-no-OFED')}]
== 2012-11-25 15:58:47,217 main.main ERROR EasyBuild crashed with an error (at easybuild/tools/build_log.py:69 in caller_info): Dependencies not met. Cannot resolve [('goalf', '1.1.0-no-OFED')]
ERROR: EasyBuild crashed with an error (at easybuild/tools/build_log.py:69 in caller_info): Dependencies not met. Cannot resolve [('goalf', '1.1.0-no-OFED')]

So either, the framework cannot locate the goalf module or it does not exist and cannot be built automagically.

boegel commented 11 years ago

Should be fixed by https://github.com/hpcugent/easybuild-framework/pull/433.

JensTimmerman commented 11 years ago

will be followd up in #433