validate checklists in biosamples format - run009, run010

[amnonkhen]

check 4k docs

• [x] compare 4k files
• [ ] there should not be mismatches metween ena xml validation and json schema validation (unless it's a bug in ENA)

[theisuru]

Still have mismatches, need to populate spreadsheet with links

Mismatching files

Mismatching validation results for checklist: ERC000031, accession: SAMEA6638676 Mismatching validation results for checklist: ERC000031, accession: SAMEA6638631 Mismatching validation results for checklist: ERC000031, accession: SAMEA6638845 Mismatching validation results for checklist: ERC000031, accession: SAMEA6638669 Mismatching validation results for checklist: ERC000045, accession: SAMEA113400769 Mismatching validation results for checklist: ERC000045, accession: SAMEA6118887 Mismatching validation results for checklist: ERC000045, accession: SAMEA4803005 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964244 Mismatching validation results for checklist: ERC000045, accession: SAMEA6118888 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964257 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964247 Mismatching validation results for checklist: ERC000045, accession: SAMEA6118878 Mismatching validation results for checklist: ERC000045, accession: SAMEA6118853 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964290 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964279 Mismatching validation results for checklist: ERC000045, accession: SAMEA4803002 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964292 Mismatching validation results for checklist: ERC000045, accession: SAMEA4803010 Mismatching validation results for checklist: ERC000045, accession: SAMEA6118875 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964265 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964251 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964297 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964286 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964294 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964264 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964267 Mismatching validation results for checklist: ERC000045, accession: SAMEA4803004 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964295 Mismatching validation results for checklist: ERC000045, accession: SAMEA4803007 Mismatching validation results for checklist: ERC000045, accession: SAMEA4803012 Mismatching validation results for checklist: ERC000045, accession: SAMEA4803008 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964274 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964262 Mismatching validation results for checklist: ERC000045, accession: SAMEA6118859 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964258 Mismatching validation results for checklist: ERC000045, accession: SAMEA6118849 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964278 Mismatching validation results for checklist: ERC000045, accession: SAMEA6118866 Mismatching validation results for checklist: ERC000045, accession: SAMEA6118855 Mismatching validation results for checklist: ERC000045, accession: SAMEA6118854 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964270 Mismatching validation results for checklist: ERC000045, accession: SAMEA4803011 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964261 Mismatching validation results for checklist: ERC000045, accession: SAMEA6118865 Mismatching validation results for checklist: ERC000045, accession: SAMEA4803000 Mismatching validation results for checklist: ERC000045, accession: SAMEA4964266 Mismatching validation results for checklist: ERC000045, accession: SAMEA4803003 Mismatching validation results for checklist: ERC000045, accession: SAMEA113400772 Mismatching validation results for checklist: ERC000015, accession: SAMEA111303379 Mismatching validation results for checklist: ERC000015, accession: SAMEA111308902 Mismatching validation results for checklist: ERC000015, accession: SAMEA111309343 Mismatching validation results for checklist: ERC000015, accession: SAMEA111309356 Mismatching validation results for checklist: ERC000015, accession: SAMEA111303371 Mismatching validation results for checklist: ERC000015, accession: SAMEA111309385 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344179 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344132 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344117 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344173 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344134 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344122 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344118 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344111 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093542 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344130 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344178 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344160 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344136 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344131 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344177 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344166 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344158 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344167 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344153 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344171 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344119 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344163 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093514 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344157 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344174 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344172 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344140 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344164 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344146 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344180 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344159 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344114 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093545 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344129 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344143 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344124 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344151 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344155 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344125 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344110 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344161 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093465 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093483 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344154 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344123 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344120 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344138 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344150 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344145 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093547 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069059 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069169 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068641 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068942 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069484 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069086 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069164 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069233 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069424 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068974 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068994 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069047 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068947 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068944 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069081 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068931 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069126 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068970 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068953 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069130 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068741 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069290 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068924 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069246 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068921 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069407 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068946 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069098 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069167 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069011 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069050 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069317 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069129 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069091 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069021 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069015 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068957 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069121 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068906 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068963 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069330 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068951 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068705 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068955 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068996 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069249 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069337 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069203 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068925 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069270 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069111 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068971 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068982 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069002 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068961 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068977 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068986 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069253 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068891 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068950 Mismatching validation results for checklist: ERC000048, accession: SAMEA6067699 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069124 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069318 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068563 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068936 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068908 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069001 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069160 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069120 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069030 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068934 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069024 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068960 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068773 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069351 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068694 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069042 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068998 Mismatching validation results for checklist: ERC000048, accession: SAMEA6067716 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068980 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069191 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068912 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069031 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069007 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069045 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069332 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069147 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069180 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068926 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069178 Mismatching validation results for checklist: ERC000048, accession: SAMEA6069026 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068892 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068895 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068988 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068654 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068979 Mismatching validation results for checklist: ERC000048, accession: SAMEA6068671 Mismatching validation results for checklist: ERC000040, accession: SAMEA110290100 Mismatching validation results for checklist: ERC000040, accession: SAMEA110290098 Mismatching validation results for checklist: ERC000040, accession: SAMEA110290099 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451012 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451059 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451004 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451043 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451054 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451009 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450996 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450998 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451008 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451010 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451024 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450988 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451057 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451056 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451051 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451031 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451007 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451040 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451025 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451029 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451030 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451020 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450992 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451000 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451055 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450994 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451053 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451044 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450997 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451028

[theisuru]

Need to get BioSamples JSON samples again without any curations: BioSamples has curation pipeline that adds curations to samples, such as removinging empty or "not provided" values. But ENA stores samples without these curations. Therefore we can see mismatches in our result comparison.

Consider SAMEA6638676 ERC000031 has organism count which was removed by BSD curations because the value of it is not collected". But organism count is a mandotory field, hence validation fails.

Next steps:

• Edit biosamples json python script to get samples without curations
• Copy xmls and xml_validation directories from run007
• Get JSONs and validate
• Compare

[theisuru]

More mismatching entries after uncurated samples

Mismatching files

Mismatching validation results for checklist: ERC000027, accession: SAMEA115344179 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344132 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344117 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344173 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344134 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344122 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344118 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344111 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093542 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344130 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344178 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344160 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344136 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344131 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344177 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344166 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344158 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344167 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344153 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344171 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344119 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344163 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093514 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344157 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344174 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344172 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344140 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344164 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344146 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344180 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344159 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344114 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093545 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344129 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344143 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344124 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344151 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344155 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344125 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344110 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344161 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093465 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093483 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344154 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344123 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344120 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344138 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344150 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344145 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093547 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184479 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184307 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184949 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184518 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184442 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184965 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184448 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184571 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184658 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184691 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184940 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184841 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184574 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184805 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184831 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184335 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184911 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184803 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184431 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184789 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184577 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184969 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184310 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184798 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184813 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184919 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184536 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184525 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184470 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184885 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184538 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184761 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184917 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184352 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184776 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184423 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184603 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184666 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184779 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184827 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184928 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184561 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184941 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184649 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184428 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184330 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184657 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184926 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184932 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184773 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184316 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184522 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184569 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184465 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184900 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184557 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184915 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184539 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184347 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184943 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184572 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184814 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184527 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184530 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184450 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184689 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184768 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184912 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184535 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184929 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184454 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184791 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184757 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184802 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184904 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184473 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184955 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184892 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184778 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184339 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184661 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184907 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184336 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184447 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184665 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184647 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184329 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184542 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184977 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184793 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184654 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184457 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184799 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184718 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184520 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184846 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184427 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184575 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184914 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184324 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451012 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451059 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451004 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451043 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451054 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451009 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450996 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450998 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451008 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451010 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451024 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450988 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451057 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451056 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451051 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451031 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451007 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451040 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451025 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451029 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451030 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451020 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450992 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451000 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451055 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450994 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451053 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451044 Mismatching validation results for checklist: ERC000040, accession: SAMEA104450997 Mismatching validation results for checklist: ERC000040, accession: SAMEA104451028

[theisuru]

Spreadsheet here

• All mismatching results are ENA -> Invalid, BSD -> valid
• Skimmed couple of them, it seems to be a problem with a special character (special character was not available in BSD JSON)
• Sadly one error points to a problem in JSON Schema - 'units' missing as a required attribute if unit is available.

[theisuru]

Fixed "units" problem with JSON Schema. Will wait for feedback on other mismatches before runnig run010

[theisuru]

run010 spreadsheet Units error is gone. Probably special character errors only

Mismatching files

Mismatching validation results for checklist: ERC000027, accession: SAMEA115344179 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344132 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344117 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344173 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344134 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344122 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344118 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344111 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093542 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344130 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344178 Mismatching validation results for checklist: ERC000027, accession: SAMEA115344160 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Mismatching validation results for checklist: ERC000027, accession: SAMEA115344145 Mismatching validation results for checklist: ERC000027, accession: SAMEA114093547 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184479 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184307 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184949 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184518 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184442 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184965 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184448 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184571 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184658 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184691 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Mismatching validation results for checklist: ERC000049, accession: SAMEA112184454 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184791 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184757 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184802 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184904 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184473 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184955 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184892 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184778 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184339 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184661 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184907 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184336 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184447 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184665 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184647 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184329 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184542 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184977 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184793 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184654 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184457 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184799 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184718 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184520 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184846 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184427 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184575 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184914 Mismatching validation results for checklist: ERC000049, accession: SAMEA112184324